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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1657
candidate regulatory elements
1294
target gene predictions
947
histone modifications
accessible chromatin
766
binding sites
120
variant allelic effects
38
chromatin state
11
caQTL
10
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
1
sQTL
Date released
2315
February, 2021
1613
September, 2022
253
May, 2021
222
February, 2024
111
November, 2021
81
October, 2022
77
May, 2020
45
March, 2020
39
May, 2024
32
August, 2017
28
January, 2021
22
August, 2021
5
September, 2023
4
February, 2023
1
April, 2019
1
August, 2020
1
August, 2022
1
January, 2020
1
January, 2022
1
May, 2022
1
November, 2019
Available data
4855
bed bed3+
883
tsv
838
bed bed9
108
txt
38
bigBed bed9
34
bed bed9+
24
csv
17
bigWig
7
bigBed narrowPeak
1
bam
Organism
4854
Homo sapiens
Biosample type
1799
cell line
1636
tissue
1129
primary cell
285
in vitro differentiated cells
4
stem cell
Organ
348
epithelium
267
brain
260
kidney
254
musculature of body
250
connective tissue
224
lung
207
intestine
178
bodily fluid
blood
166
embryo
155
limb
152
skin of body
149
heart
130
vasculature
127
large intestine
103
extraembryonic component
97
blood vessel
96
pancreas
85
stomach
79
liver
73
uterus
66
mammary gland
61
small intestine
58
prostate gland
55
bone element
52
placenta
51
penis
50
adrenal gland
47
ureter
46
lymph node
42
adipose tissue
39
eye
36
thymus
artery
32
gonad
29
esophagus
27
spinal cord
24
spleen
17
testis
16
lymphoid tissue
15
ovary
15
thyroid gland
15
vein
13
lymphatic vessel
12
mouth
11
bronchus
11
nerve
11
pituitary gland
9
bone marrow
8
breast
7
skeleton
6
tongue
6
urinary bladder
6
vagina
4
trachea
2
nose
Project
4712
AMP
111
ENCODE
31
T1D
1
ITG
Genome assembly (visualization)
4849
hg19
416
GRCh38
1
hg18
annotation_type!
accessible chromatin
organ_slims!
artery
blood
BIOSAMPLE
TYPE
4855 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
binding sites
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
pQTL
variant to gene
sQTL
cell line
HeLa-S3
5
55
1
A549
21
19
1
2
H1-hESC
1
39
1
2
MCF-7
9
6
2
3
breast cancer cell
11
9
+ See 716 more…
tissue
stomach
40
21
1
heart
37
20
1
1
2
brain
29
16
3
1
1
lung
33
17
muscle of arm
33
16
1
+ See 191 more…
primary cell
monocyte
2
86
1
1
1
CD8-positive, alpha-beta T cell
7
5
30
common myeloid progenitor, CD34-positive
27
14
B cell
17
10
CD14-positive monocyte
8
19
+ See 260 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
19
10
1
1
neural progenitor cell
5
5
14
adipocyte
4
6
1
1
4
T-cell acute lymphoblastic leukemia
5
3
mesenchymal stem cell
3
3
1
1
+ See 91 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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