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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1531
candidate regulatory elements
1268
target gene predictions
969
histone modifications
accessible chromatin
809
binding sites
113
variant allelic effects
40
chromatin state
13
caQTL
8
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
1
sQTL
Date released
2292
February, 2021
1500
September, 2022
258
May, 2021
249
February, 2024
111
November, 2021
99
October, 2022
69
May, 2020
44
March, 2020
39
May, 2024
34
August, 2017
28
January, 2021
21
August, 2021
6
February, 2023
5
September, 2023
1
April, 2019
1
August, 2020
1
August, 2022
1
January, 2020
1
January, 2022
1
May, 2022
1
November, 2019
Available data
4763
bed bed3+
781
bed bed9
649
tsv
38
bigBed bed9
34
bed bed9+
24
csv
21
txt
17
bigWig
7
bigBed narrowPeak
1
bam
Organism
4762
Homo sapiens
Biosample type
1936
cell line
1413
tissue
1123
primary cell
285
in vitro differentiated cells
4
stem cell
Organ
348
epithelium
267
brain
kidney
254
musculature of body
250
connective tissue
224
lung
207
intestine
178
bodily fluid
169
blood
166
embryo
155
limb
152
skin of body
149
heart
130
vasculature
127
large intestine
103
extraembryonic component
97
blood vessel
96
pancreas
85
stomach
79
liver
73
uterus
66
mammary gland
61
small intestine
58
prostate gland
55
bone element
52
placenta
51
penis
50
adrenal gland
47
ureter
46
lymph node
42
adipose tissue
39
eye
thymus
35
artery
32
gonad
29
esophagus
27
spinal cord
24
spleen
17
testis
16
lymphoid tissue
15
ovary
15
thyroid gland
15
vein
13
lymphatic vessel
12
mouth
11
bronchus
11
nerve
11
pituitary gland
9
bone marrow
8
breast
7
skeleton
6
tongue
6
urinary bladder
6
vagina
4
trachea
2
nose
Project
4620
AMP
111
ENCODE
31
T1D
1
ITG
Genome assembly (visualization)
4755
hg19
447
GRCh38
1
hg18
annotation_type!
accessible chromatin
organ_slims!
kidney
thymus
BIOSAMPLE
TYPE
4763 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
binding sites
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
pQTL
variant to gene
sQTL
cell line
HeLa-S3
5
55
1
A549
21
19
1
2
H1-hESC
1
39
1
2
K562
7
23
1
2
1
MCF-7
9
6
2
3
+ See 734 more…
tissue
stomach
40
21
1
heart
37
20
1
1
2
brain
29
16
3
1
1
lung
33
17
muscle of arm
33
16
1
+ See 179 more…
primary cell
monocyte
2
86
1
1
1
CD8-positive, alpha-beta T cell
7
5
30
common myeloid progenitor, CD34-positive
27
14
B cell
17
10
CD14-positive monocyte
8
19
+ See 259 more…
in vitro differentiated cells
hematopoietic multipotent progenitor cell
19
10
1
1
neural progenitor cell
5
5
14
adipocyte
4
6
1
1
4
T-cell acute lymphoblastic leukemia
5
3
mesenchymal stem cell
3
3
1
1
+ See 91 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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