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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
candidate regulatory elements
54
target gene predictions
33
chromatin state
accessible chromatin
6
binding sites
6
histone modifications
3
eQTL
3
gene expression
Date released
98
September, 2022
47
February, 2021
15
May, 2021
August, 2017
3
February, 2024
3
January, 2022
3
March, 2024
3
November, 2021
1
March, 2020
1
October, 2022
Available data
135
bed bed3+
33
bed bed9
3
tsv
Organism
174
Homo sapiens
Biosample type
131
tissue
40
cell line
3
primary cell
Organ
734
epithelium
601
kidney
414
brain
365
connective tissue
343
musculature of body
295
lung
264
intestine
228
heart
228
vasculature
222
limb
209
pancreas
204
bodily fluid
202
embryo
193
blood
190
skin of body
176
blood vessel
161
large intestine
137
extraembryonic component
129
liver
110
stomach
80
adipose tissue
80
small intestine
80
uterus
79
mammary gland
74
bone element
73
prostate gland
69
placenta
66
adrenal gland
63
artery
61
penis
60
ureter
54
lymph node
50
eye
47
thymus
45
gonad
41
esophagus
41
spinal cord
32
spleen
24
testis
22
lymphoid tissue
22
nerve
21
ovary
21
thyroid gland
20
vein
18
mouth
17
lymphatic vessel
13
bronchus
13
pituitary gland
12
breast
11
bone marrow
10
skeleton
10
vagina
9
tongue
9
urinary bladder
4
trachea
3
nose
1
pericardium
Project
171
AMP
3
ENCODE
Genome assembly (visualization)
168
hg19
41
GRCh38
annotation_type!
accessible chromatin
month_released!
August, 2017
May, 2019
BIOSAMPLE
TYPE
174 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
histone modifications
eQTL
gene expression
tissue
large intestine
27
14
13
1
sigmoid colon
10
7
5
transverse colon
8
5
4
1
colonic mucosa
4
2
2
1
mucosa of rectum
4
2
2
+ See 9 more…
cell line
pituitary stalk
10
HT-29
2
2
1
1
1
HCT116
2
3
1
SW480
2
1
1
1
1
HCT-116 cell
1
2
+ See 4 more…
primary cell
colon epithelial cell
3
See all biosamples
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