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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
candidate regulatory elements
44
target gene predictions
36
chromatin state
accessible chromatin
5
binding sites
5
histone modifications
2
eQTL
2
gene expression
Date released
98
September, 2022
46
February, 2021
5
May, 2021
3
August, 2017
3
February, 2024
3
November, 2021
2
January, 2022
2
March, 2024
1
March, 2020
October, 2022
Available data
126
bed bed3+
33
bed bed9
2
tsv
Organism
163
Homo sapiens
Biosample type
131
tissue
29
cell line
3
primary cell
Organ
732
epithelium
591
kidney
400
brain
359
connective tissue
339
musculature of body
292
lung
267
intestine
224
vasculature
220
heart
218
limb
210
pancreas
202
embryo
187
bodily fluid
187
skin of body
176
blood
171
blood vessel
163
large intestine
136
extraembryonic component
131
liver
111
stomach
81
small intestine
79
uterus
77
adipose tissue
77
mammary gland
73
bone element
73
prostate gland
68
placenta
66
adrenal gland
60
ureter
59
artery
59
penis
52
lymph node
47
thymus
46
eye
44
gonad
41
esophagus
39
spinal cord
32
spleen
23
testis
22
lymphoid tissue
21
ovary
21
thyroid gland
20
lymphatic vessel
20
vein
19
nerve
18
mouth
13
bronchus
13
pituitary gland
12
breast
11
bone marrow
10
skeleton
10
vagina
9
tongue
9
urinary bladder
4
trachea
3
nose
Project
160
AMP
3
ENCODE
Genome assembly (visualization)
159
hg19
40
GRCh38
annotation_type!
accessible chromatin
month_released!
February, 2020
October, 2022
BIOSAMPLE
TYPE
163 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
histone modifications
eQTL
gene expression
tissue
large intestine
27
14
13
1
sigmoid colon
10
7
5
transverse colon
8
5
4
1
colonic mucosa
4
2
3
1
mucosa of rectum
4
2
3
+ See 7 more…
cell line
HT-29
2
2
1
1
1
HCT116
2
3
1
SW480
2
1
1
1
1
RKO
1
1
1
colon epithelial cell
1
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
See all biosamples
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