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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
81
target gene predictions
23
candidate regulatory elements
23
chromatin state
accessible chromatin
4
gene expression
3
eQTL
1
binding sites
1
variant allelic effects
Date released
69
September, 2022
52
February, 2024
February, 2021
5
May, 2021
4
March, 2024
3
January, 2022
1
March, 2020
1
November, 2021
1
October, 2022
Available data
106
bed bed3+
23
bed bed9
4
tsv
Organism
136
Homo sapiens
Biosample type
90
cell line
37
tissue
9
primary cell
Organ
541
epithelium
414
kidney
314
brain
264
connective tissue
256
musculature of body
226
lung
197
intestine
182
heart
182
vasculature
181
pancreas
172
limb
150
embryo
143
blood vessel
132
bodily fluid
125
blood
123
skin of body
118
large intestine
107
liver
104
extraembryonic component
82
stomach
70
uterus
63
small intestine
59
adipose tissue
52
adrenal gland
52
mammary gland
51
placenta
50
artery
46
bone element
44
prostate gland
42
ureter
36
thymus
33
eye
33
gonad
33
penis
32
spinal cord
31
esophagus
27
lymph node
22
spleen
19
nerve
17
lymphoid tissue
17
ovary
17
thyroid gland
16
testis
14
mouth
14
vein
12
lymphatic vessel
12
pituitary gland
9
breast
9
skeleton
8
bronchus
8
urinary bladder
8
vagina
7
tongue
6
bone marrow
3
nose
1
pericardium
Project
135
AMP
1
ENCODE
Genome assembly (visualization)
129
hg19
78
GRCh38
annotation_type!
accessible chromatin
month_released!
February, 2021
BIOSAMPLE
TYPE
136 results
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target gene predictions
candidate regulatory elements
chromatin state
gene expression
eQTL
binding sites
variant allelic effects
cell line
HeLa-S3
55
3
3
1
22Rv1
2
2
2
LNCaP clone FGC
2
2
2
C4-2B
1
1
1
PC-3
1
1
1
+ See 4 more…
tissue
spleen
8
6
6
1
1
prostate gland
2
2
2
1
uterus
2
1
1
1
1
cervix - ectocervix
1
prostate
1
primary cell
epithelial cell of prostate
3
2
2
luminal epithelial cell of prostatic duct
1
uterine smooth muscle cell
1
See all biosamples
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