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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 3016target gene predictions
  • 2638pQTL
  • accessible chromatin
  • 944chromatin state
  • 872candidate regulatory elements
  • 508gene expression
  • 484differential activity
  • 177eQTL
  • 140variant allelic effects
  • 137histone modifications
  • 99binding sites
  • 74Fine-mapped variants
  • 25caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
Date released
  • 2636February, 2025
  • February, 2021
  • 2505September, 2022
  • 1661July, 2026
  • 363May, 2021
  • 324February, 2024
  • 320May, 2026
  • 286September, 2023
  • 128March, 2020
  • 111November, 2021
  • 102January, 2022
  • 101May, 2020
  • 101October, 2022
  • 98August, 2021
  • 70March, 2023
  • 64February, 2020
  • 40May, 2024
  • 35August, 2017
  • 35May, 2022
  • 30March, 2024
  • 28January, 2021
  • 24January, 2020
  • 21July, 2025
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 7February, 2023
  • 5October, 2019
  • 4March, 2026
  • 2January, 2018
  • 2January, 2025
  • 2November, 2019
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1November, 2020
Available data
  • 4441bed bed3+
  • 3373tsv
  • 869bed bed9
  • 40bigBed bed9
  • 34bed bed9+
  • 29txt
  • 26csv
  • 15bigWig
  • 4bigBed narrowPeak
  • 1bam
Organism
  • 9133Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2499EpiMap
  • 1458ENCODE-rE2G
  • 417DGA
  • 365T1D
  • 320pyxis
  • 281KPMP
  • 263AMP
  • 206BLUEPRINT
  • 203HDMA
  • 1744DN
  • 150T2DKP
  • 149GTEx
  • 122ENCODE
  • 117 T2DKP
  • 101T2D
  • 101eQTLCatalogue
  • 55HPAP
  • 26FNIH_projects-heart
  • 24CMDGA
  • 12FNIH_projects-liver
  • 12ROADMAP
  • 1ChIP-Atlas
Biosample type
  • 5121tissue
  • 2659primary cell
  • 1094cell line
  • 256in vitro differentiated cells
  • 4stem cell
Organ
  • 3283blood
  • 2818vasculature
  • 2800blood vessel
  • 2767bodily fluid
  • 2650vein
  • 600brain
  • 543epithelium
  • 518kidney
  • 399heart
  • 337lung
  • 321connective tissue
  • 266intestine
  • 263musculature of body
  • 223pancreas
  • 196skin of body
  • 177liver
  • 172limb
  • 170large intestine
  • 150embryo
  • 132extraembryonic component
  • 112adipose tissue
  • 103stomach
  • 89muscle organ
  • 80uterus
  • 77adrenal gland
  • 76small intestine
  • 75placenta
  • 69mammary gland
  • 66eye
  • 63artery
  • 63bone element
  • 63thymus
  • 60__MARKER__
  • 53prostate gland
  • 51ureter
  • 47gonad
  • 39spleen
  • 38spinal cord
  • 34esophagus
  • 33penis
  • 33thyroid gland
  • 27lymph node
  • 26ovary
  • 21testis
  • 19nerve
  • 17lymphoid tissue
  • 16mouth
  • 15skeleton
  • 12lymphatic vessel
  • 12pituitary gland
  • 11breast
  • 11urinary bladder
  • 10vagina
  • 9tongue
  • 8bronchus
  • 6bone marrow
  • 3nose
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 8691AMP
  • 281KPMP
  • 111ENCODE
  • 31T1D
  • 17community
  • 5ITG
Genome assembly (visualization)
  • 3696hg19
  • 3178GRCh38
  • 4hg18
annotation_type!
  • accessible chromatin
month_released!
  • February, 2021
BIOSAMPLE
TYPE

9136 results

search-icontable-tab-icon
Clear Filters
target gene predictions
pQTL
chromatin state
candidate regulatory elements
gene expression
differential activity
eQTL
variant allelic effects
histone modifications
binding sites
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
tissue
whole blood26351
head of caudate nucleus86
heart382119312
stomach42191911
brain301816121
primary cell
monocyte2154484121
T-cell64
CD8-positive, alpha-beta T cell271330
endothelial cell173525223
CD4-positive, alpha-beta T cell523
cell line
A5493318181
HeLa-S359331
H1-hESC391181
K56230761
MCF-713551
in vitro differentiated cells
hematopoietic multipotent progenitor cell2210101
neural progenitor cell644714
adipocyte762
progenitor cell of endocrine pancreas19
extended pluripotent stem (EPS) cells9
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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