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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2844target gene predictions
  • 2638pQTL
  • 1707candidate regulatory elements
  • accessible chromatin
  • 977histone modifications
  • 939chromatin state
  • 811binding sites
  • 611gene expression
  • 484differential activity
  • 173eQTL
  • 85variant allelic effects
  • 74Fine-mapped variants
  • 25caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2636February, 2025
  • 2579February, 2021
  • 2505September, 2022
  • 1661July, 2026
  • 363May, 2021
  • February, 2024
  • 320May, 2026
  • 286September, 2023
  • 128March, 2020
  • 111November, 2021
  • 102January, 2022
  • 101May, 2020
  • 101October, 2022
  • 98August, 2021
  • 70March, 2023
  • 64February, 2020
  • 40May, 2024
  • 35August, 2017
  • 35May, 2022
  • 30March, 2024
  • 28January, 2021
  • 24January, 2020
  • 21July, 2025
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 7February, 2023
  • 5October, 2019
  • 4March, 2026
  • 2January, 2018
  • 2January, 2025
  • 2November, 2019
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1November, 2020
Available data
  • 6592bed bed3+
  • 3489tsv
  • 869bed bed9
  • 112txt
  • 40bigBed bed9
  • 34bed bed9+
  • 6bigWig
  • 4bigBed narrowPeak
  • 2csv
  • 1bam
Organism
  • 11388Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2498EpiMap
  • 1559ChIP-Atlas
  • 1458ENCODE-rE2G
  • 959ENCODE
  • 480DGA
  • 346T1D
  • 320pyxis
  • 281KPMP
  • 250AMP
  • 203HDMA
  • 181BLUEPRINT
  • 151GTEx
  • 147T2DKP
  • 111 T2DKP
  • 101T2D
  • 101eQTLCatalogue
  • 55HPAP
  • 26FNIH_projects-heart
  • 24CMDGA
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 5746tissue
  • 2993primary cell
  • 2228cell line
  • 418in vitro differentiated cells
  • 4stem cell
Organ
  • 3325blood
  • 2854vasculature
  • 2825blood vessel
  • 2813bodily fluid
  • 2657vein
  • 709brain
  • 705kidney
  • 689epithelium
  • 441heart
  • 419connective tissue
  • 406lung
  • 346musculature of body
  • 331intestine
  • 263skin of body
  • 244pancreas
  • 224limb
  • 213large intestine
  • 183liver
  • 165extraembryonic component
  • 152embryo
  • 135adipose tissue
  • 130stomach
  • 96mammary gland
  • 94small intestine
  • 93placenta
  • 91bone element
  • 90adrenal gland
  • 89muscle organ
  • 83eye
  • 81prostate gland
  • 77artery
  • 74thymus
  • 69ureter
  • 61penis
  • 60__MARKER__
  • 59gonad
  • 54lymph node
  • 49spleen
  • 47spinal cord
  • 42esophagus
  • 39uterus
  • 36thyroid gland
  • 30ovary
  • 29testis
  • 22nerve
  • 21lymphoid tissue
  • 20mouth
  • 17lymphatic vessel
  • 16skeleton
  • 14breast
  • 13pituitary gland
  • 12bronchus
  • 12urinary bladder
  • 12vagina
  • 11bone marrow
  • 11tongue
  • 4trachea
  • 3nose
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 10946AMP
  • 281KPMP
  • 111ENCODE
  • 31T1D
  • 17community
  • 5ITG
Genome assembly (visualization)
  • 5835hg19
  • 2984GRCh38
  • 4hg18
annotation_type!
  • accessible chromatin
month_released!
  • February, 2024
BIOSAMPLE
TYPE

11391 results

search-icontable-tab-icon
Clear Filters
target gene predictions
pQTL
candidate regulatory elements
histone modifications
chromatin state
binding sites
gene expression
differential activity
eQTL
variant allelic effects
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart38371211412
stomach424011911
head of caudate nucleus86
brain30293181121
primary cell
monocyte28611544121
CD8-positive, alpha-beta T cell2773013
T-cell644
common myeloid progenitor, CD34-positive262713
CD4-positive, alpha-beta T cell5283
cell line
A54933211182
MCF-7139253
K562147172
HCT1161721
breast cancer cell119
in vitro differentiated cells
hematopoietic multipotent progenitor cell221911011
neural progenitor cell651547
adipocyte741611
cardiomyocytes11
mesenchymal stem cell43121
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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