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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
164
candidate regulatory elements
100
target gene predictions
83
chromatin state
accessible chromatin
9
histone modifications
6
binding sites
5
gene expression
5
variant allelic effects
4
eQTL
Date released
233
September, 2022
100
February, 2021
12
November, 2021
8
February, 2024
8
May, 2021
5
August, 2017
5
March, 2024
4
January, 2022
March, 2020
1
October, 2022
Available data
289
bed bed3+
78
bed bed9
5
tsv
Organism
376
Homo sapiens
Biosample type
328
tissue
30
cell line
18
primary cell
Organ
730
epithelium
599
kidney
386
brain
363
connective tissue
339
musculature of body
295
lung
266
intestine
218
vasculature
215
limb
214
heart
206
bodily fluid
203
pancreas
202
embryo
195
blood
191
skin of body
166
blood vessel
163
large intestine
137
extraembryonic component
121
liver
110
stomach
80
mammary gland
80
small intestine
80
uterus
74
adipose tissue
74
bone element
73
prostate gland
69
placenta
65
adrenal gland
61
penis
60
ureter
58
artery
54
lymph node
50
eye
46
thymus
44
gonad
40
esophagus
38
spinal cord
31
spleen
24
testis
22
lymphoid tissue
21
thyroid gland
20
ovary
20
vein
19
nerve
18
mouth
17
lymphatic vessel
13
bronchus
13
pituitary gland
12
breast
11
bone marrow
10
skeleton
10
vagina
9
tongue
8
urinary bladder
4
trachea
3
nose
1
pericardium
Project
364
AMP
12
ENCODE
Genome assembly (visualization)
367
hg19
96
GRCh38
annotation_type!
accessible chromatin
month_released!
July, 2020
March, 2020
BIOSAMPLE
TYPE
376 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
histone modifications
binding sites
gene expression
variant allelic effects
eQTL
tissue
stomach
40
21
19
1
1
1
small intestine
29
16
15
1
large intestine
27
14
13
1
sigmoid colon
10
6
5
transverse colon
8
5
4
1
+ See 19 more…
cell line
HT-29
2
2
1
1
1
HCT116
2
3
1
SW480
2
1
1
1
1
HCT-116 cell
1
2
RKO
1
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
enterocyte
3
enteric smooth muscle cell
2
parietal cell
1
1
peptic cell
1
1
+ See 6 more…
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