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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2638pQTL
  • 1709candidate regulatory elements
  • 1313target gene predictions
  • 977histone modifications
  • 944chromatin state
  • accessible chromatin
  • 816binding sites
  • 674gene expression
  • 180eQTL
  • 164differential activity
  • 141variant allelic effects
  • 25caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 2Fine-mapped variants
  • 1representative DNase hypersensitivity sites
Date released
  • 2636February, 2025
  • 2579February, 2021
  • 2505September, 2022
  • 363May, 2021
  • 324February, 2024
  • 286September, 2023
  • March, 2020
  • 111November, 2021
  • 102January, 2022
  • 101May, 2020
  • 101October, 2022
  • 98August, 2021
  • 70March, 2023
  • 64February, 2020
  • 40May, 2024
  • 35August, 2017
  • 35May, 2022
  • 30March, 2024
  • 28January, 2021
  • 24January, 2020
  • 21July, 2025
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 7February, 2023
  • 5October, 2019
  • 4March, 2026
  • 2January, 2018
  • 2January, 2025
  • 2November, 2019
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1November, 2020
Available data
  • 5136bed bed3+
  • 3472tsv
  • 869bed bed9
  • 112txt
  • 40bigBed bed9
  • 34bed bed9+
  • 26csv
  • 18bigWig
  • 7bigBed narrowPeak
  • 1bam
Organism
  • 9603Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2499EpiMap
  • 1559ChIP-Atlas
  • 958ENCODE
  • 519DGA
  • 371T1D
  • 282AMP
  • 281KPMP
  • 206BLUEPRINT
  • 1744DN
  • 151T2DKP
  • 110 T2DKP
  • 101T2D
  • 101eQTLCatalogue
  • 79GTEx
  • 55HPAP
  • 26FNIH_projects-heart
  • 24CMDGA
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 4986tissue
  • 2182cell line
  • 2043primary cell
  • 391in vitro differentiated cells
  • 2stem cell
Organ
  • 2857vasculature
  • 2841bodily fluid
  • 2830blood
  • 2802blood vessel
  • 2655vein
  • 742epithelium
  • 599kidney
  • 387brain
  • 372connective tissue
  • 346musculature of body
  • 295lung
  • 266intestine
  • 218heart
  • 215limb
  • 203pancreas
  • 202embryo
  • 191skin of body
  • 163large intestine
  • 137extraembryonic component
  • 123liver
  • 110stomach
  • 80mammary gland
  • 80small intestine
  • 80uterus
  • 74bone element
  • 73prostate gland
  • 72adipose tissue
  • 69placenta
  • 65adrenal gland
  • 61penis
  • 60ureter
  • 58artery
  • 54lymph node
  • 50eye
  • 46thymus
  • 44gonad
  • 40esophagus
  • 38spinal cord
  • 31spleen
  • 24testis
  • 22lymphoid tissue
  • 21thyroid gland
  • 20lymphatic vessel
  • 20ovary
  • 19nerve
  • 18mouth
  • 13bronchus
  • 13pituitary gland
  • 12breast
  • 11bone marrow
  • 10skeleton
  • 10vagina
  • 9tongue
  • 8urinary bladder
  • 4trachea
  • 3nose
  • 1pericardium
Project
  • 9161AMP
  • 281KPMP
  • 111ENCODE
  • 31T1D
  • 17community
  • 5ITG
Genome assembly (visualization)
  • 5980hg19
  • 1445GRCh38
  • 4hg18
annotation_type!
  • accessible chromatin
month_released!
  • March, 2020
BIOSAMPLE
TYPE

9606 results

search-icontable-tab-icon
Clear Filters
pQTL
candidate regulatory elements
target gene predictions
histone modifications
chromatin state
binding sites
gene expression
eQTL
differential activity
variant allelic effects
caQTL
sQTL
hQTL
variant to gene
meQTL
other
Fine-mapped variants
representative DNase hypersensitivity sites
tissue
whole blood26351
heart37191211412
stomach402111911
brain29163181121
kidney29142161711
cell line
HeLa-S355531
A54921191182
H1-hESC1391128
K562723172
MCF-796253
primary cell
monocyte2861154121
common myeloid progenitor, CD34-positive271413
CD8-positive, alpha-beta T cell753013
B cell171082
CD4-positive, alpha-beta memory T cell1499
in vitro differentiated cells
hematopoietic multipotent progenitor cell191011011
neural progenitor cell541547
adipocyte461611
cardiomyocytes11
mesenchymal stem cell33121
stem cell
H1-hESC1
undifferentiated ESC (H9 cell line)1
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