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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2879target gene predictions
  • 2638pQTL
  • 1709candidate regulatory elements
  • accessible chromatin
  • 939chromatin state
  • 863histone modifications
  • 817binding sites
  • 595gene expression
  • 484differential activity
  • 177eQTL
  • 141variant allelic effects
  • 74Fine-mapped variants
  • 25caQTL
  • 4sQTL
  • 4variant to gene
  • 2other
  • 1representative DNase hypersensitivity sites
Date released
  • 2636February, 2025
  • 2579February, 2021
  • 2505September, 2022
  • 1661July, 2026
  • May, 2021
  • 324February, 2024
  • 320May, 2026
  • 286September, 2023
  • 128March, 2020
  • 111November, 2021
  • 102January, 2022
  • 101May, 2020
  • 101October, 2022
  • 98August, 2021
  • 70March, 2023
  • 64February, 2020
  • 40May, 2024
  • 35August, 2017
  • 35May, 2022
  • 30March, 2024
  • 28January, 2021
  • 24January, 2020
  • 21July, 2025
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 7February, 2023
  • 5October, 2019
  • 4March, 2026
  • 2January, 2018
  • 2January, 2025
  • 2November, 2019
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1November, 2020
Available data
  • 6583bed bed3+
  • 3463tsv
  • 864bed bed9
  • 112txt
  • 35bigBed bed9
  • 34bed bed9+
  • 26csv
  • 18bigWig
  • 7bigBed narrowPeak
  • 1bam
Organism
  • 11349Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2499EpiMap
  • 1559ChIP-Atlas
  • 1458ENCODE-rE2G
  • 960ENCODE
  • 426DGA
  • 320pyxis
  • 281KPMP
  • 257AMP
  • 203HDMA
  • 179T1D
  • 1744DN
  • 151GTEx
  • 151T2DKP
  • 109 T2DKP
  • 101T2D
  • 101eQTLCatalogue
  • 76BLUEPRINT
  • 55HPAP
  • 26FNIH_projects-heart
  • 24CMDGA
  • 12FNIH_projects-liver
Biosample type
  • 5724tissue
  • 2871primary cell
  • 2340cell line
  • 411in vitro differentiated cells
  • 4stem cell
Organ
  • 3349blood
  • 2863vasculature
  • 2837bodily fluid
  • 2832blood vessel
  • 2656vein
  • 712epithelium
  • 706kidney
  • 699brain
  • 442heart
  • 413connective tissue
  • 403lung
  • 349musculature of body
  • 331intestine
  • 259skin of body
  • 229pancreas
  • 221limb
  • 211large intestine
  • 199liver
  • 196embryo
  • 162extraembryonic component
  • 132adipose tissue
  • 130stomach
  • 95mammary gland
  • 93small intestine
  • 92placenta
  • 91bone element
  • 89adrenal gland
  • 89muscle organ
  • 88uterus
  • 83eye
  • 80prostate gland
  • 75artery
  • 73thymus
  • 69ureter
  • 60__MARKER__
  • 60penis
  • 58gonad
  • 53lymph node
  • 48spleen
  • 46spinal cord
  • 44esophagus
  • 36thyroid gland
  • 29ovary
  • 29testis
  • 22lymphoid tissue
  • 22nerve
  • 20mouth
  • 17lymphatic vessel
  • 16skeleton
  • 13breast
  • 13bronchus
  • 12urinary bladder
  • 12vagina
  • 11bone marrow
  • 11tongue
  • 4trachea
  • 3nose
  • 3pituitary gland
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 10907AMP
  • 281KPMP
  • 111ENCODE
  • 31T1D
  • 17community
  • 5ITG
Genome assembly (visualization)
  • 5825hg19
  • 3094GRCh38
  • 4hg18
annotation_type!
  • accessible chromatin
month_released!
  • May, 2021
BIOSAMPLE
TYPE

11352 results

search-icontable-tab-icon
Clear Filters
target gene predictions
pQTL
candidate regulatory elements
chromatin state
histone modifications
binding sites
gene expression
differential activity
eQTL
variant allelic effects
Fine-mapped variants
caQTL
sQTL
variant to gene
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart38372111412
stomach404019111
head of caudate nucleus86
brain30291831121
primary cell
T-cell624
common myeloid progenitor, CD34-positive252713
CD4-positive, alpha-beta T cell5283
endothelial cell17312825223
stimulated activated CD4-positive, alpha-beta T cell55
cell line
A54932211812
HeLa-S358531
H1-hESC3811128
K562297712
MCF-7129523
in vitro differentiated cells
hematopoietic multipotent progenitor cell22191011
neural progenitor cell654157
adipocyte346111
cardiomyocytes11
endodermal cell442
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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