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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2638pQTL
  • 2184target gene predictions
  • accessible chromatin
  • 971histone modifications
  • 877candidate regulatory elements
  • 817binding sites
  • 685gene expression
  • 484differential activity
  • 180eQTL
  • 141variant allelic effects
  • 111chromatin state
  • 74Fine-mapped variants
  • 25caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2636February, 2025
  • 2579February, 2021
  • September, 2022
  • 1661July, 2026
  • 363May, 2021
  • 324February, 2024
  • 320May, 2026
  • 286September, 2023
  • 128March, 2020
  • 111November, 2021
  • 102January, 2022
  • 101May, 2020
  • 101October, 2022
  • 98August, 2021
  • 70March, 2023
  • 64February, 2020
  • 40May, 2024
  • 35August, 2017
  • 35May, 2022
  • 30March, 2024
  • 28January, 2021
  • 24January, 2020
  • 21July, 2025
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 7February, 2023
  • 5October, 2019
  • 4March, 2026
  • 2January, 2018
  • 2January, 2025
  • 2November, 2019
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1November, 2020
Available data
  • 5170bed bed3+
  • 3551tsv
  • 112txt
  • 40bigBed bed9
  • 36bed bed9
  • 34bed bed9+
  • 26csv
  • 17bigWig
  • 6bigBed narrowPeak
  • 1bam
Organism
  • 9207Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 1558ChIP-Atlas
  • 1458ENCODE-rE2G
  • 960ENCODE
  • 569DGA
  • 371T1D
  • 320pyxis
  • 281KPMP
  • 279AMP
  • 206BLUEPRINT
  • 203HDMA
  • 1744DN
  • 151GTEx
  • 151T2DKP
  • 137 T2DKP
  • 101T2D
  • 101eQTLCatalogue
  • 55HPAP
  • 26FNIH_projects-heart
  • 24CMDGA
  • 12FNIH_projects-liver
  • 12ROADMAP
  • 1EpiMap
Biosample type
  • 4378tissue
  • 2632primary cell
  • 1854cell line
  • 340in vitro differentiated cells
  • 4stem cell
Organ
  • 3284blood
  • 2793vasculature
  • 2777blood vessel
  • 2766bodily fluid
  • 2651vein
  • 593epithelium
  • 530brain
  • 481kidney
  • 338heart
  • 309connective tissue
  • 214pancreas
  • 197lung
  • 173intestine
  • 162skin of body
  • 156liver
  • 151musculature of body
  • 122embryo
  • 118large intestine
  • 111adipose tissue
  • 89muscle organ
  • 86limb
  • 78uterus
  • 66extraembryonic component
  • 63stomach
  • 60__MARKER__
  • 58artery
  • 56eye
  • 55mammary gland
  • 49adrenal gland
  • 49bone element
  • 45placenta
  • 43prostate gland
  • 41thymus
  • 37small intestine
  • 35gonad
  • 31penis
  • 31spleen
  • 30lymph node
  • 30ureter
  • 25thyroid gland
  • 23esophagus
  • 23spinal cord
  • 18ovary
  • 17testis
  • 13nerve
  • 13pituitary gland
  • 11lymphatic vessel
  • 8bone marrow
  • 8breast
  • 8mouth
  • 7bronchus
  • 7lymphoid tissue
  • 7skeleton
  • 6urinary bladder
  • 6vagina
  • 5tongue
  • 4trachea
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 8765AMP
  • 281KPMP
  • 111ENCODE
  • 31T1D
  • 17community
  • 5ITG
Genome assembly (visualization)
  • 3592hg19
  • 2340GRCh38
  • 4hg18
annotation_type!
  • accessible chromatin
month_released!
  • September, 2022
BIOSAMPLE
TYPE

9210 results

search-icontable-tab-icon
Clear Filters
pQTL
target gene predictions
histone modifications
candidate regulatory elements
binding sites
gene expression
differential activity
eQTL
variant allelic effects
chromatin state
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
head of caudate nucleus86
dorsolateral prefrontal cortex5711
heart1911814122
posterior cingulate gyrus48
primary cell
monocyte28611544121
CD8-positive, alpha-beta T cell2730731
T-cell644
endothelial cell17132925223
CD4-positive, alpha-beta T cell5283
cell line
HeLa-S35621
H1-hESC38128
K562241121
A54915132
H9146
in vitro differentiated cells
neural progenitor cell21517
hematopoietic multipotent progenitor cell121911
adipocyte512114
cardiomyocytes11
progenitor cell of endocrine pancreas19
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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