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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2638pQTL
  • 971histone modifications
  • accessible chromatin
  • 877candidate regulatory elements
  • 817binding sites
  • 685gene expression
  • 523target gene predictions
  • 484differential activity
  • 180eQTL
  • 141variant allelic effects
  • 111chromatin state
  • 74Fine-mapped variants
  • 25caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2636February, 2025
  • 2579February, 2021
  • September, 2022
  • 363May, 2021
  • 324February, 2024
  • 320May, 2026
  • 286September, 2023
  • 128March, 2020
  • 111November, 2021
  • 102January, 2022
  • 101May, 2020
  • 101October, 2022
  • 98August, 2021
  • 70March, 2023
  • 64February, 2020
  • 40May, 2024
  • 35August, 2017
  • 35May, 2022
  • 30March, 2024
  • 28January, 2021
  • 24January, 2020
  • 21July, 2025
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 7February, 2023
  • 5October, 2019
  • 4March, 2026
  • 2January, 2018
  • 2January, 2025
  • 2November, 2019
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1November, 2020
Available data
  • 3551tsv
  • 3509bed bed3+
  • 112txt
  • 40bigBed bed9
  • 36bed bed9
  • 34bed bed9+
  • 26csv
  • 17bigWig
  • 6bigBed narrowPeak
  • 1bam
Organism
  • 7546Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 1558ChIP-Atlas
  • 960ENCODE
  • 569DGA
  • 371T1D
  • 320pyxis
  • 281KPMP
  • 279AMP
  • 206BLUEPRINT
  • 1744DN
  • 151GTEx
  • 151T2DKP
  • 137 T2DKP
  • 101T2D
  • 101eQTLCatalogue
  • 55HPAP
  • 26FNIH_projects-heart
  • 24CMDGA
  • 12FNIH_projects-liver
  • 12ROADMAP
  • 1EpiMap
Biosample type
  • 3714tissue
  • 1886primary cell
  • 1647cell line
  • 296in vitro differentiated cells
  • 4stem cell
Organ
  • 2796vasculature
  • 2766bodily fluid
  • 2764blood vessel
  • 2761blood
  • 2650vein
  • 602epithelium
  • 394kidney
  • 312connective tissue
  • 263brain
  • 237heart
  • 196pancreas
  • 151musculature of body
  • 122embryo
  • 117liver
  • 107adipose tissue
  • 104intestine
  • 89skin of body
  • 86limb
  • 86lung
  • 68uterus
  • 66large intestine
  • 60__MARKER__
  • 53artery
  • 42stomach
  • 38extraembryonic component
  • 38mammary gland
  • 34prostate gland
  • 32bone element
  • 31penis
  • 30lymph node
  • 24adrenal gland
  • 24small intestine
  • 23eye
  • 21gonad
  • 21placenta
  • 21ureter
  • 20esophagus
  • 17spinal cord
  • 14lymphatic vessel
  • 14spleen
  • 14thymus
  • 13nerve
  • 13pituitary gland
  • 12testis
  • 9ovary
  • 9thyroid gland
  • 8bone marrow
  • 7bronchus
  • 7lymphoid tissue
  • 6breast
  • 6mouth
  • 4trachea
  • 4vagina
  • 3tongue
  • 3urinary bladder
  • 1pericardium
  • 1skeleton
Project
  • 7104AMP
  • 281KPMP
  • 111ENCODE
  • 31T1D
  • 17community
  • 5ITG
Genome assembly (visualization)
  • 3592hg19
  • 679GRCh38
  • 4hg18
annotation_type!
  • accessible chromatin
month_released!
  • September, 2022
BIOSAMPLE
TYPE

7549 results

search-icontable-tab-icon
Clear Filters
pQTL
histone modifications
candidate regulatory elements
binding sites
gene expression
target gene predictions
differential activity
eQTL
variant allelic effects
chromatin state
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
islet of Langerhans121111313222
heart118141122
kidney21517112
stomach121121
primary cell
monocyte86115244121
endothelial cell1329725223
CD8-positive, alpha-beta T cell307351
macrophage32317832
smooth muscle cell21617222
cell line
HeLa-S32152
H1-hESC12838
K562112171
breast cancer cell119
HFFc619
in vitro differentiated cells
neural progenitor cell15171
adipocyte121144
hematopoietic multipotent progenitor cell1911
cardiomyocytes11
extended pluripotent stem (EPS) cells9
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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