Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 84target gene predictions
  • 57candidate regulatory elements
  • 28chromatin state
  • 13binding sites
  • accessible chromatin
  • 11histone modifications
  • 10gene expression
Date released
  • 81September, 2022
  • 53February, 2021
  • 51February, 2024
  • 8August, 2021
  • 7May, 2021
  • 1August, 2017
  • 1March, 2020
  • 1October, 2022
Available data
  • 166bed bed3+
  • 27bed bed9
  • 10tsv
Organism
  • 203Homo sapiens
Collection Tags
  • 81EpiMap
  • 514DN
  • 31ENCODE
  • 23ChIP-Atlas
  • 10AMP
  • 6DGA
Biosample type
  • 121cell line
  • 33tissue
  • 30in vitro differentiated cells
  • 18primary cell
  • 1stem cell
Organ
  • 2877vasculature
  • 2847bodily fluid
  • 2836blood
  • 2822blood vessel
  • 2656vein
  • 746epithelium
  • 602kidney
  • 425brain
  • 392connective tissue
  • 353musculature of body
  • 296lung
  • 268intestine
  • 231heart
  • 224limb
  • 212pancreas
  • 203embryo
  • 191skin of body
  • 164large intestine
  • 139liver
  • 137extraembryonic component
  • 111stomach
  • 92adipose tissue
  • 81small intestine
  • 80mammary gland
  • 80uterus
  • 74bone element
  • 73prostate gland
  • 69placenta
  • 68artery
  • 66adrenal gland
  • 61penis
  • 60ureter
  • 54lymph node
  • 50eye
  • 47thymus
  • 45gonad
  • 41esophagus
  • 41spinal cord
  • 32spleen
  • 24testis
  • 22lymphoid tissue
  • 22nerve
  • 21ovary
  • 21thyroid gland
  • 20lymphatic vessel
  • 18mouth
  • 13bronchus
  • 13pituitary gland
  • 12breast
  • 11bone marrow
  • 10skeleton
  • 10vagina
  • 9tongue
  • 9urinary bladder
  • 4trachea
  • 3nose
  • 1pericardium
Project
  • 203AMP
Genome assembly (visualization)
  • 193hg19
  • 78GRCh38
annotation_type!
  • accessible chromatin
BIOSAMPLE
TYPE

203 results

search-icontable-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
chromatin state
binding sites
histone modifications
gene expression
cell line
H1-hESC3911218
H9871
CyT4941
H7-hESC2111
HUES61211
tissue
chorionic villus484
trophoblast3421
embryonic facial prominence111
first pancreatic bud11
cardiogenic mesoderm1
in vitro differentiated cells
endodermal cell242
mesodermal cell1411
trophoblast cell221
ectodermal cell121
cardiac mesoderm primordium111
primary cell
trophoblast cell5741
primordial germ cell1
stem cell
H1-hESC1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego