Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 25candidate regulatory elements
  • 25gene expression
  • accessible chromatin
  • 21target gene predictions
  • 17chromatin state
  • 14histone modifications
  • 13binding sites
  • 10eQTL
  • 5differential activity
  • 4Fine-mapped variants
  • 4variant allelic effects
  • 1caQTL
Date released
  • 46September, 2022
  • 25February, 2021
  • 20February, 2024
  • 10August, 2021
  • 10March, 2020
  • 5March, 2025
  • 4March, 2023
  • 3August, 2017
  • 3May, 2020
  • 3May, 2021
  • 2February, 2020
  • 2May, 2024
  • 1January, 2020
  • 1January, 2022
  • 1July, 2020
  • 1May, 2022
  • 1November, 2021
  • 1October, 2022
Available data
  • 84bed bed3+
  • 33tsv
  • 14bed bed9
  • 9bigWig
  • 3csv
  • 1bam
  • 1bigBed bed9
Organism
  • 139Homo sapiens
Collection Tags
  • 42EpiMap
  • 36DGA
  • 24AMP
  • 13 T2DKP
  • 12ChIP-Atlas
  • 11ENCODE
  • 11T2DKP
  • 6STARNET
  • 5GTEx
  • 4HPAP
  • 2FNIH_projects-liver
  • 1T1D
  • 1T2D
  • 1eQTLCatalogue
Biosample type
  • 59tissue
  • 48primary cell
  • 25cell line
  • 7in vitro differentiated cells
Organ
  • 2877vasculature
  • 2847bodily fluid
  • 2836blood
  • 2822blood vessel
  • 2656vein
  • 746epithelium
  • 602kidney
  • 425brain
  • 392connective tissue
  • 353musculature of body
  • 296lung
  • 268intestine
  • 231heart
  • 224limb
  • 212pancreas
  • 203embryo
  • 191skin of body
  • 164large intestine
  • 139liver
  • 137extraembryonic component
  • 111stomach
  • 92adipose tissue
  • 81small intestine
  • 80mammary gland
  • 80uterus
  • 74bone element
  • 73prostate gland
  • 69placenta
  • 68artery
  • 66adrenal gland
  • 61penis
  • 60ureter
  • 54lymph node
  • 50eye
  • 47thymus
  • 45gonad
  • 41esophagus
  • 41spinal cord
  • 32spleen
  • 24testis
  • 22lymphoid tissue
  • 22nerve
  • 21ovary
  • 21thyroid gland
  • 20lymphatic vessel
  • 18mouth
  • 13bronchus
  • 13pituitary gland
  • 12breast
  • 11bone marrow
  • 10skeleton
  • 10vagina
  • 9tongue
  • 9urinary bladder
  • 4trachea
  • 3nose
  • 1pericardium
Project
  • 138AMP
  • 1ENCODE
Genome assembly (visualization)
  • 102hg19
  • 44GRCh38
  • 2hg18
annotation_type!
  • accessible chromatin
BIOSAMPLE
TYPE

139 results

search-icontable-tab-icon
Clear Filters
candidate regulatory elements
gene expression
target gene predictions
chromatin state
histone modifications
binding sites
eQTL
differential activity
Fine-mapped variants
variant allelic effects
caQTL
tissue
liver132109219211
right lobe of liver211113
primary cell
hepatocyte21331412
endothelial cell of hepatic sinusoid46
hepatic stellate cell211111
pancreatic endothelial cell13
Liver fetal (hepatocyte)1
cell line
HepG223253
HuH-711111
HuH-7.5111
hepatic stellate cell11
in vitro differentiated cells
hepatocyte211
hepatocyte(AFP)3
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego