Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 146candidate regulatory elements
  • 80target gene predictions
  • 74chromatin state
  • accessible chromatin
  • 11eQTL
  • 11gene expression
  • 7binding sites
  • 7histone modifications
  • 7variant allelic effects
  • 6Fine-mapped variants
  • 6caQTL
Date released
  • 204September, 2022
  • 92February, 2021
  • 9February, 2024
  • 9March, 2020
  • 8July, 2025
  • 6February, 2020
  • 6May, 2021
  • 5May, 2020
  • 3August, 2017
  • 3November, 2021
  • 3October, 2022
  • 2March, 2024
  • 2May, 2019
  • 1August, 2021
  • 1January, 2022
  • 1October, 2019
Available data
  • 257bed bed3+
  • 71bed bed9
  • 21tsv
  • 3bigBed bed9
Organism
  • 355Homo sapiens
Collection Tags
  • 204EpiMap
  • 79ENCODE
  • 27DGA
  • 26 T2DKP
  • 13ChIP-Atlas
  • 12GTEx
  • 5AMP
  • 5T2DKP
  • 1T1D
  • 1T2D
  • 1eQTLCatalogue
Biosample type
  • 297tissue
  • 41primary cell
  • 15cell line
  • 2in vitro differentiated cells
Organ
  • 2869vasculature
  • 2841bodily fluid
  • 2830blood
  • 2814blood vessel
  • 2656vein
  • 748epithelium
  • 602kidney
  • 425brain
  • 381connective tissue
  • 355musculature of body
  • 296lung
  • 268intestine
  • 233heart
  • 224limb
  • 212pancreas
  • 203embryo
  • 191skin of body
  • 164large intestine
  • 137extraembryonic component
  • 133liver
  • 111stomach
  • 81small intestine
  • 80adipose tissue
  • 80mammary gland
  • 80uterus
  • 74bone element
  • 73prostate gland
  • 69placenta
  • 66adrenal gland
  • 64artery
  • 61penis
  • 60ureter
  • 54lymph node
  • 50eye
  • 47thymus
  • 45gonad
  • 41esophagus
  • 41spinal cord
  • 32spleen
  • 24testis
  • 22lymphoid tissue
  • 22nerve
  • 21ovary
  • 21thyroid gland
  • 20lymphatic vessel
  • 18mouth
  • 13bronchus
  • 13pituitary gland
  • 12breast
  • 11bone marrow
  • 10skeleton
  • 10vagina
  • 9tongue
  • 9urinary bladder
  • 4trachea
  • 3nose
  • 1pericardium
Project
  • 352AMP
  • 3ENCODE
Genome assembly (visualization)
  • 340hg19
  • 83GRCh38
annotation_type!
  • accessible chromatin
BIOSAMPLE
TYPE

355 results

search-icontable-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
eQTL
gene expression
binding sites
histone modifications
variant allelic effects
Fine-mapped variants
caQTL
tissue
muscle of arm3316161
muscle of leg271415
muscle of back281313
psoas muscle784
gastrocnemius medialis854
primary cell
skeletal muscle satellite cell222121
skeletal muscle cell2111
skeletal muscle fiber22
type I muscle cell1111
type II muscle cell1111
cell line
LHCN-M221111
A673221
SJCRH30211
in vitro differentiated cells
myotube11
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego