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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2768target gene predictions
  • 2638pQTL
  • 1709candidate regulatory elements
  • accessible chromatin
  • 977histone modifications
  • 944chromatin state
  • 817binding sites
  • 685gene expression
  • 484differential activity
  • 180eQTL
  • 141variant allelic effects
  • 74Fine-mapped variants
  • 25caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2636February, 2025
  • 2579February, 2021
  • 2505September, 2022
  • 1661July, 2026
  • 324February, 2024
  • 320May, 2026
  • 286September, 2023
  • 224May, 2021
  • 128March, 2020
  • 102January, 2022
  • 101May, 2020
  • 101October, 2022
  • 98August, 2021
  • 70March, 2023
  • 64February, 2020
  • 40May, 2024
  • 35August, 2017
  • 35May, 2022
  • 30March, 2024
  • 28January, 2021
  • 24January, 2020
  • 21July, 2025
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 7February, 2023
  • 5October, 2019
  • 4March, 2026
  • 2January, 2018
  • 2January, 2025
  • 2November, 2019
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1November, 2020
Available data
  • 6592bed bed3+
  • 3551tsv
  • 869bed bed9
  • 112txt
  • 40bigBed bed9
  • 34bed bed9+
  • 26csv
  • 18bigWig
  • 7bigBed narrowPeak
  • 1bam
Organism
  • 11462Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2499EpiMap
  • 1559ChIP-Atlas
  • 1458ENCODE-rE2G
  • 960ENCODE
  • 431DGA
  • 371T1D
  • 320pyxis
  • 281KPMP
  • 206BLUEPRINT
  • 203HDMA
  • 1744DN
  • 173AMP
  • 151GTEx
  • 115 T2DKP
  • 101T2D
  • 101eQTLCatalogue
  • 55HPAP
  • 40T2DKP
  • 26FNIH_projects-heart
  • 24CMDGA
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 5726tissue
  • 2957primary cell
  • 2348cell line
  • 428in vitro differentiated cells
  • 4stem cell
Organ
  • 3349blood
  • 2862vasculature
  • 2837bodily fluid
  • 2832blood vessel
  • 2656vein
  • 706kidney
  • 699brain
  • 680epithelium
  • 439heart
  • 400lung
  • 398connective tissue
  • 346musculature of body
  • 323intestine
  • 254skin of body
  • 240pancreas
  • 221limb
  • 208large intestine
  • 198embryo
  • 198liver
  • 162extraembryonic component
  • 132adipose tissue
  • 126stomach
  • 92mammary gland
  • 92placenta
  • 91bone element
  • 91small intestine
  • 89muscle organ
  • 87uterus
  • 85adrenal gland
  • 83eye
  • 80prostate gland
  • 75artery
  • 73thymus
  • 69ureter
  • 60__MARKER__
  • 60penis
  • 57gonad
  • 53lymph node
  • 48spleen
  • 46spinal cord
  • 42esophagus
  • 35thyroid gland
  • 29testis
  • 28ovary
  • 22lymphoid tissue
  • 22nerve
  • 20mouth
  • 16lymphatic vessel
  • 16skeleton
  • 13breast
  • 12bronchus
  • 12urinary bladder
  • 12vagina
  • 11bone marrow
  • 11tongue
  • 4trachea
  • 3nose
  • 3pituitary gland
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 11131AMP
  • 281KPMP
  • 31T1D
  • 17community
  • 5ITG
Genome assembly (visualization)
  • 5847hg19
  • 3067GRCh38
  • 4hg18
annotation_type!
  • accessible chromatin
software_used.software.name!
  • abc
BIOSAMPLE
TYPE

11465 results

search-icontable-tab-icon
Clear Filters
target gene predictions
pQTL
candidate regulatory elements
histone modifications
chromatin state
binding sites
gene expression
differential activity
eQTL
variant allelic effects
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart38371211412
stomach404011911
head of caudate nucleus86
brain30293181121
primary cell
monocyte28611544121
T-cell624
CD8-positive, alpha-beta T cell2473013
common myeloid progenitor, CD34-positive252713
CD4-positive, alpha-beta T cell5183
cell line
A54932211182
HeLa-S358531
H1-hESC3811128
K562297172
MCF-7129253
in vitro differentiated cells
hematopoietic multipotent progenitor cell221911011
neural progenitor cell651547
adipocyte341611
cardiomyocytes11
endodermal cell442
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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