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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 1709candidate regulatory elements
  • 1107target gene predictions
  • 977histone modifications
  • 944chromatin state
  • accessible chromatin
  • 817binding sites
  • 689gene expression
  • 189eQTL
  • 172differential activity
  • 141variant allelic effects
  • 84Fine-mapped variants
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 2579February, 2021
  • 2505September, 2022
  • 329February, 2024
  • 286September, 2023
  • 224May, 2021
  • 128March, 2020
  • 102January, 2022
  • 101May, 2020
  • 101October, 2022
  • 98August, 2021
  • 70March, 2023
  • 64February, 2020
  • 40May, 2024
  • 38March, 2025
  • 35August, 2017
  • 35May, 2022
  • 30March, 2024
  • 28January, 2021
  • 24January, 2020
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 7February, 2023
  • 5October, 2019
  • 2January, 2018
  • 2January, 2025
  • 2November, 2019
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1November, 2020
Available data
  • 4931bed bed3+
  • 3576tsv
  • 869bed bed9
  • 108txt
  • 40bigBed bed9
  • 34bed bed9+
  • 26csv
  • 18bigWig
  • 7bigBed narrowPeak
  • 1bam
Organism
  • 9502Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2499EpiMap
  • 1559ChIP-Atlas
  • 960ENCODE
  • 431DGA
  • 371T1D
  • 281KPMP
  • 206BLUEPRINT
  • 1744DN
  • 173AMP
  • 151GTEx
  • 115 T2DKP
  • 101T2D
  • 101eQTLCatalogue
  • 55HPAP
  • 43STARNET
  • 40T2DKP
  • 26FNIH_projects-heart
  • 24CMDGA
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 5098tissue
  • 2141cell line
  • 1876primary cell
  • 384in vitro differentiated cells
  • 4stem cell
Organ
  • 2873vasculature
  • 2843bodily fluid
  • 2832blood
  • 2819blood vessel
  • 2655vein
  • 687epithelium
  • 602kidney
  • 414brain
  • 361connective tissue
  • 344musculature of body
  • 289lung
  • 254intestine
  • 224heart
  • 221limb
  • 198embryo
  • 198pancreas
  • 181skin of body
  • 156large intestine
  • 135liver
  • 134extraembryonic component
  • 105stomach
  • 89adipose tissue
  • 78small intestine
  • 77uterus
  • 75mammary gland
  • 74bone element
  • 71prostate gland
  • 68placenta
  • 66artery
  • 60adrenal gland
  • 60penis
  • 60ureter
  • 53lymph node
  • 50eye
  • 46thymus
  • 43gonad
  • 40spinal cord
  • 39esophagus
  • 31spleen
  • 24testis
  • 22lymphoid tissue
  • 22nerve
  • 19lymphatic vessel
  • 19ovary
  • 19thyroid gland
  • 18mouth
  • 12bronchus
  • 11bone marrow
  • 11breast
  • 10skeleton
  • 10vagina
  • 9tongue
  • 9urinary bladder
  • 4trachea
  • 3nose
  • 3pituitary gland
  • 1pericardium
Project
  • 9175AMP
  • 281KPMP
  • 31T1D
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 5847hg19
  • 1406GRCh38
  • 4hg18
annotation_type!
  • accessible chromatin
software_used.software.name!
  • abc
BIOSAMPLE
TYPE

9505 results

search-icontable-tab-icon
Clear Filters
pQTL
candidate regulatory elements
target gene predictions
histone modifications
chromatin state
binding sites
gene expression
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart3720121132
stomach401911911
brain29163181121
kidney29142161711
cell line
HeLa-S355431
A54921181182
H1-hESC1381128
K562722172
MCF-795253
primary cell
monocyte2861154121
common myeloid progenitor, CD34-positive271313
CD8-positive, alpha-beta T cell723013
B cell17982
CD4-positive, alpha-beta memory T cell1499
in vitro differentiated cells
hematopoietic multipotent progenitor cell191011011
neural progenitor cell551547
adipocyte421611
cardiomyocytes11
extended pluripotent stem (EPS) cells9
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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