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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 1709candidate regulatory elements
  • 1357target gene predictions
  • 977histone modifications
  • accessible chromatin
  • 726binding sites
  • 689gene expression
  • 189eQTL
  • 172differential activity
  • 141variant allelic effects
  • 84Fine-mapped variants
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 2579February, 2021
  • 1672September, 2022
  • 358May, 2021
  • 324February, 2024
  • 286September, 2023
  • 128March, 2020
  • 111November, 2021
  • 102January, 2022
  • 98August, 2021
  • 98May, 2020
  • 70March, 2023
  • 64February, 2020
  • 40May, 2024
  • 38March, 2025
  • 30March, 2024
  • 28January, 2021
  • 18January, 2020
  • 10October, 2022
  • 9August, 2018
  • 7February, 2023
  • 2January, 2018
  • 2January, 2025
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1May, 2022
  • 1November, 2019
  • 1November, 2020
Available data
  • 5050bed bed3+
  • 3576tsv
  • 108txt
  • 26csv
  • 16bigWig
  • 7bigBed narrowPeak
Organism
  • 8717Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 1666EpiMap
  • 1559ChIP-Atlas
  • 869ENCODE
  • 560DGA
  • 371T1D
  • 283AMP
  • 281KPMP
  • 1744DN
  • 172BLUEPRINT
  • 151GTEx
  • 149T2DKP
  • 138 T2DKP
  • 101T2D
  • 101eQTLCatalogue
  • 55HPAP
  • 43STARNET
  • 26FNIH_projects-heart
  • 24CMDGA
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 4615tissue
  • 1930cell line
  • 1813primary cell
  • 357in vitro differentiated cells
  • 3stem cell
Organ
  • 2840vasculature
  • 2801bodily fluid
  • 2792blood
  • 2792blood vessel
  • 2650vein
  • 688epithelium
  • 523kidney
  • 347brain
  • 333connective tissue
  • 278musculature of body
  • 221lung
  • 208intestine
  • 195pancreas
  • 180heart
  • 174embryo
  • 174limb
  • 152skin of body
  • 127large intestine
  • 121liver
  • 103extraembryonic component
  • 87stomach
  • 82adipose tissue
  • 75uterus
  • 62mammary gland
  • 61small intestine
  • 60prostate gland
  • 59artery
  • 58bone element
  • 52adrenal gland
  • 52placenta
  • 49penis
  • 47ureter
  • 44lymph node
  • 39eye
  • 36gonad
  • 36thymus
  • 34esophagus
  • 32spinal cord
  • 26spleen
  • 19testis
  • 18lymphatic vessel
  • 18nerve
  • 17lymphoid tissue
  • 17ovary
  • 17thyroid gland
  • 14mouth
  • 13pituitary gland
  • 11bronchus
  • 10breast
  • 9bone marrow
  • 8vagina
  • 7skeleton
  • 7tongue
  • 7urinary bladder
  • 4trachea
  • 2nose
  • 1pericardium
Project
  • 8279AMP
  • 281KPMP
  • 111ENCODE
  • 31T1D
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 5062hg19
  • 648GRCh38
  • 4hg18
annotation_type!
  • accessible chromatin
software_used.software.name!
  • chromhmm
BIOSAMPLE
TYPE

8720 results

search-icontable-tab-icon
Clear Filters
pQTL
candidate regulatory elements
target gene predictions
histone modifications
binding sites
gene expression
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart37201132
stomach4021111
kidney291421711
brain291631121
cell line
HeLa-S3555
H1-hESC139118
A549211911
K56272311
breast cancer cell119
primary cell
monocyte2861154121
CD8-positive, alpha-beta T cell75303
common myeloid progenitor, CD34-positive2714
B cell17102
CD14-positive monocyte819
in vitro differentiated cells
hematopoietic multipotent progenitor cell1910111
neural progenitor cell55157
adipocyte46111
cardiomyocytes11
extended pluripotent stem (EPS) cells9
stem cell
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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