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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 1709candidate regulatory elements
  • 1357target gene predictions
  • 977histone modifications
  • 944chromatin state
  • accessible chromatin
  • 817binding sites
  • 689gene expression
  • 189eQTL
  • 172differential activity
  • 84Fine-mapped variants
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 5variant allelic effects
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 2578February, 2021
  • 2505September, 2022
  • 363May, 2021
  • 286September, 2023
  • 273February, 2024
  • 128March, 2020
  • 111November, 2021
  • 102January, 2022
  • 101October, 2022
  • 98August, 2021
  • 70March, 2023
  • 64February, 2020
  • 40May, 2024
  • 38March, 2025
  • 35August, 2017
  • 35May, 2022
  • 30March, 2024
  • 28January, 2021
  • 24January, 2020
  • 22May, 2020
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 7February, 2023
  • 5October, 2019
  • 2January, 2018
  • 2January, 2025
  • 2November, 2019
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1November, 2020
Available data
  • 5061bed bed3+
  • 3576tsv
  • 869bed bed9
  • 108txt
  • 40bigBed bed9
  • 34bed bed9+
  • 26csv
  • 14bigWig
  • 3bigBed narrowPeak
  • 1bam
Organism
  • 9616Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2499EpiMap
  • 1559ChIP-Atlas
  • 958ENCODE
  • 440DGA
  • 371T1D
  • 284AMP
  • 281KPMP
  • 206BLUEPRINT
  • 1744DN
  • 151GTEx
  • 147T2DKP
  • 128 T2DKP
  • 101T2D
  • 101eQTLCatalogue
  • 55HPAP
  • 43STARNET
  • 26FNIH_projects-heart
  • 24CMDGA
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 5078tissue
  • 2187cell line
  • 1953primary cell
  • 395in vitro differentiated cells
  • 4stem cell
Organ
  • 2862vasculature
  • 2847bodily fluid
  • 2836blood
  • 2813blood vessel
  • 2655vein
  • 705epithelium
  • 586kidney
  • 408brain
  • 376connective tissue
  • 346musculature of body
  • 295lung
  • 265intestine
  • 221heart
  • 216limb
  • 203embryo
  • 201pancreas
  • 190skin of body
  • 164large intestine
  • 137extraembryonic component
  • 135liver
  • 109stomach
  • 89adipose tissue
  • 81small intestine
  • 80uterus
  • 79mammary gland
  • 74bone element
  • 72prostate gland
  • 69placenta
  • 65adrenal gland
  • 64artery
  • 61penis
  • 57ureter
  • 54lymph node
  • 48eye
  • 47thymus
  • 45gonad
  • 41spinal cord
  • 39esophagus
  • 32spleen
  • 24testis
  • 22lymphoid tissue
  • 21ovary
  • 20lymphatic vessel
  • 20nerve
  • 20thyroid gland
  • 18mouth
  • 13pituitary gland
  • 12breast
  • 12bronchus
  • 11bone marrow
  • 10skeleton
  • 10vagina
  • 9tongue
  • 9urinary bladder
  • 4trachea
  • 3nose
  • 1pericardium
Project
  • 9178AMP
  • 281KPMP
  • 111ENCODE
  • 31T1D
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 5977hg19
  • 1517GRCh38
  • 4hg18
annotation_type!
  • accessible chromatin
software_used.software.name!
  • deltasvm
BIOSAMPLE
TYPE

9619 results

search-icontable-tab-icon
Clear Filters
pQTL
candidate regulatory elements
target gene predictions
histone modifications
chromatin state
binding sites
gene expression
eQTL
differential activity
Fine-mapped variants
caQTL
sQTL
hQTL
variant allelic effects
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart372012113
stomach402111911
brain2916318112
kidney2914216171
cell line
HeLa-S355531
A54921191182
H1-hESC1391128
K562723172
MCF-796253
primary cell
monocyte2861154121
common myeloid progenitor, CD34-positive271413
CD8-positive, alpha-beta T cell753013
B cell171082
CD4-positive, alpha-beta memory T cell1499
in vitro differentiated cells
hematopoietic multipotent progenitor cell191011011
neural progenitor cell551547
adipocyte461611
cardiomyocytes11
mesenchymal stem cell33121
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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