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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 3018target gene predictions
  • 2638pQTL
  • 1709candidate regulatory elements
  • accessible chromatin
  • 977histone modifications
  • 944chromatin state
  • 817binding sites
  • 685gene expression
  • 484differential activity
  • 180eQTL
  • 74Fine-mapped variants
  • 25caQTL
  • 7sQTL
  • 5hQTL
  • 5variant allelic effects
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2636February, 2025
  • 2578February, 2021
  • 2505September, 2022
  • 1661July, 2026
  • 363May, 2021
  • 320May, 2026
  • 286September, 2023
  • 268February, 2024
  • 128March, 2020
  • 111November, 2021
  • 102January, 2022
  • 101October, 2022
  • 98August, 2021
  • 70March, 2023
  • 64February, 2020
  • 40May, 2024
  • 35August, 2017
  • 35May, 2022
  • 30March, 2024
  • 28January, 2021
  • 24January, 2020
  • 22May, 2020
  • 21July, 2025
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 7February, 2023
  • 5October, 2019
  • 4March, 2026
  • 2January, 2018
  • 2January, 2025
  • 2November, 2019
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1November, 2020
Available data
  • 6722bed bed3+
  • 3551tsv
  • 869bed bed9
  • 112txt
  • 40bigBed bed9
  • 34bed bed9+
  • 26csv
  • 14bigWig
  • 3bigBed narrowPeak
  • 1bam
Organism
  • 11576Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2499EpiMap
  • 1559ChIP-Atlas
  • 1458ENCODE-rE2G
  • 958ENCODE
  • 440DGA
  • 371T1D
  • 320pyxis
  • 284AMP
  • 281KPMP
  • 206BLUEPRINT
  • 203HDMA
  • 1744DN
  • 151GTEx
  • 147T2DKP
  • 128 T2DKP
  • 101T2D
  • 101eQTLCatalogue
  • 55HPAP
  • 26FNIH_projects-heart
  • 24CMDGA
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 5706tissue
  • 3034primary cell
  • 2394cell line
  • 439in vitro differentiated cells
  • 4stem cell
Organ
  • 3353blood
  • 2851vasculature
  • 2841bodily fluid
  • 2826blood vessel
  • 2656vein
  • 698epithelium
  • 693brain
  • 690kidney
  • 436heart
  • 413connective tissue
  • 406lung
  • 348musculature of body
  • 334intestine
  • 263skin of body
  • 243pancreas
  • 216large intestine
  • 216limb
  • 203embryo
  • 198liver
  • 165extraembryonic component
  • 132adipose tissue
  • 130stomach
  • 96mammary gland
  • 94small intestine
  • 93placenta
  • 91bone element
  • 90adrenal gland
  • 90uterus
  • 89muscle organ
  • 81eye
  • 81prostate gland
  • 74thymus
  • 73artery
  • 66ureter
  • 61penis
  • 60__MARKER__
  • 59gonad
  • 54lymph node
  • 49spleen
  • 47spinal cord
  • 42esophagus
  • 36thyroid gland
  • 30ovary
  • 29testis
  • 22lymphoid tissue
  • 20mouth
  • 20nerve
  • 17lymphatic vessel
  • 16skeleton
  • 14breast
  • 13pituitary gland
  • 12bronchus
  • 12urinary bladder
  • 12vagina
  • 11bone marrow
  • 11tongue
  • 4trachea
  • 3nose
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 11134AMP
  • 281KPMP
  • 111ENCODE
  • 31T1D
  • 17community
  • 5ITG
Genome assembly (visualization)
  • 5977hg19
  • 3178GRCh38
  • 4hg18
annotation_type!
  • accessible chromatin
software_used.software.name!
  • deltasvm
BIOSAMPLE
TYPE

11579 results

search-icontable-tab-icon
Clear Filters
target gene predictions
pQTL
candidate regulatory elements
histone modifications
chromatin state
binding sites
gene expression
differential activity
eQTL
Fine-mapped variants
caQTL
sQTL
hQTL
variant allelic effects
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
stomach424011911
heart3837121141
head of caudate nucleus86
brain3029318112
primary cell
monocyte28611544121
CD8-positive, alpha-beta T cell2773013
T-cell644
common myeloid progenitor, CD34-positive262713
CD4-positive, alpha-beta T cell5283
cell line
A54933211182
HeLa-S359531
H1-hESC3911128
K562307172
MCF-7139253
in vitro differentiated cells
hematopoietic multipotent progenitor cell221911011
neural progenitor cell651547
adipocyte741611
cardiomyocytes11
mesenchymal stem cell43121
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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