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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2638pQTL
  • 1709candidate regulatory elements
  • 1357target gene predictions
  • 977histone modifications
  • 944chromatin state
  • accessible chromatin
  • 817binding sites
  • 685gene expression
  • 484differential activity
  • 180eQTL
  • 74Fine-mapped variants
  • 25caQTL
  • 7sQTL
  • 5hQTL
  • 5variant allelic effects
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2636February, 2025
  • 2578February, 2021
  • 2505September, 2022
  • 363May, 2021
  • 320May, 2026
  • 286September, 2023
  • 268February, 2024
  • 128March, 2020
  • 111November, 2021
  • 102January, 2022
  • 101October, 2022
  • 98August, 2021
  • 70March, 2023
  • 64February, 2020
  • 40May, 2024
  • 35August, 2017
  • 35May, 2022
  • 30March, 2024
  • 28January, 2021
  • 24January, 2020
  • 22May, 2020
  • 21July, 2025
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 7February, 2023
  • 5October, 2019
  • 4March, 2026
  • 2January, 2018
  • 2January, 2025
  • 2November, 2019
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1November, 2020
Available data
  • 5061bed bed3+
  • 3551tsv
  • 869bed bed9
  • 112txt
  • 40bigBed bed9
  • 34bed bed9+
  • 26csv
  • 14bigWig
  • 3bigBed narrowPeak
  • 1bam
Organism
  • 9915Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2499EpiMap
  • 1559ChIP-Atlas
  • 958ENCODE
  • 440DGA
  • 371T1D
  • 320pyxis
  • 284AMP
  • 281KPMP
  • 206BLUEPRINT
  • 1744DN
  • 151GTEx
  • 147T2DKP
  • 128 T2DKP
  • 101T2D
  • 101eQTLCatalogue
  • 55HPAP
  • 26FNIH_projects-heart
  • 24CMDGA
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 5042tissue
  • 2288primary cell
  • 2187cell line
  • 395in vitro differentiated cells
  • 4stem cell
Organ
  • 2854vasculature
  • 2841bodily fluid
  • 2830blood
  • 2813blood vessel
  • 2655vein
  • 707epithelium
  • 603kidney
  • 426brain
  • 416connective tissue
  • 348musculature of body
  • 335heart
  • 295lung
  • 265intestine
  • 225pancreas
  • 216limb
  • 203embryo
  • 190skin of body
  • 164large intestine
  • 159liver
  • 137extraembryonic component
  • 128adipose tissue
  • 109stomach
  • 81small intestine
  • 80uterus
  • 79mammary gland
  • 74bone element
  • 72prostate gland
  • 69placenta
  • 68artery
  • 65adrenal gland
  • 61penis
  • 60__MARKER__
  • 57ureter
  • 54lymph node
  • 48eye
  • 47thymus
  • 45gonad
  • 41spinal cord
  • 39esophagus
  • 32spleen
  • 24testis
  • 22lymphoid tissue
  • 21ovary
  • 20lymphatic vessel
  • 20nerve
  • 20thyroid gland
  • 18mouth
  • 13pituitary gland
  • 12breast
  • 12bronchus
  • 11bone marrow
  • 10skeleton
  • 10vagina
  • 9tongue
  • 9urinary bladder
  • 4trachea
  • 3nose
  • 1pericardium
Project
  • 9473AMP
  • 281KPMP
  • 111ENCODE
  • 31T1D
  • 17community
  • 5ITG
Genome assembly (visualization)
  • 5977hg19
  • 1517GRCh38
  • 4hg18
annotation_type!
  • accessible chromatin
software_used.software.name!
  • deltasvm
BIOSAMPLE
TYPE

9918 results

search-icontable-tab-icon
Clear Filters
pQTL
candidate regulatory elements
target gene predictions
histone modifications
chromatin state
binding sites
gene expression
differential activity
eQTL
Fine-mapped variants
caQTL
sQTL
hQTL
variant allelic effects
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart3720121141
stomach402111911
brain2916318112
kidney2914216171
primary cell
monocyte28611544121
common myeloid progenitor, CD34-positive271413
endothelial cell371292523
B cell17108213
CD8-positive, alpha-beta T cell753013
cell line
HeLa-S355531
A54921191182
H1-hESC1391128
K562723172
MCF-796253
in vitro differentiated cells
hematopoietic multipotent progenitor cell191011011
neural progenitor cell551547
adipocyte461611
cardiomyocytes11
mesenchymal stem cell33121
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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