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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 1357target gene predictions
  • 977histone modifications
  • 944chromatin state
  • accessible chromatin
  • 871candidate regulatory elements
  • 817binding sites
  • 689gene expression
  • 189eQTL
  • 172differential activity
  • 141variant allelic effects
  • 84Fine-mapped variants
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 2505September, 2022
  • 1742February, 2021
  • 363May, 2021
  • 328February, 2024
  • 286September, 2023
  • 128March, 2020
  • 111November, 2021
  • 102January, 2022
  • 101May, 2020
  • 101October, 2022
  • 98August, 2021
  • 70March, 2023
  • 64February, 2020
  • 40May, 2024
  • 38March, 2025
  • 35August, 2017
  • 35May, 2022
  • 30March, 2024
  • 28January, 2021
  • 24January, 2020
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 7February, 2023
  • 5October, 2019
  • 2January, 2018
  • 2January, 2025
  • 2November, 2019
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1November, 2020
Available data
  • 4343bed bed3+
  • 3576tsv
  • 869bed bed9
  • 108txt
  • 40bigBed bed9
  • 34bed bed9+
  • 26csv
  • 18bigWig
  • 7bigBed narrowPeak
  • 1bam
Organism
  • 8914Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2499EpiMap
  • 1559ChIP-Atlas
  • 570DGA
  • 371T1D
  • 284AMP
  • 281KPMP
  • 206BLUEPRINT
  • 1744DN
  • 151GTEx
  • 151T2DKP
  • 138 T2DKP
  • 122ENCODE
  • 101T2D
  • 101eQTLCatalogue
  • 55HPAP
  • 43STARNET
  • 26FNIH_projects-heart
  • 24CMDGA
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 4648tissue
  • 2041cell line
  • 1865primary cell
  • 357in vitro differentiated cells
  • 4stem cell
Organ
  • 2851vasculature
  • 2825bodily fluid
  • 2816blood
  • 2802blood vessel
  • 2652vein
  • 694epithelium
  • 518kidney
  • 374brain
  • 352connective tissue
  • 275musculature of body
  • 235lung
  • 210intestine
  • 201pancreas
  • 197heart
  • 176limb
  • 173embryo
  • 150skin of body
  • 130liver
  • 128large intestine
  • 111extraembryonic component
  • 83stomach
  • 81adipose tissue
  • 75uterus
  • 66mammary gland
  • 64artery
  • 63bone element
  • 63small intestine
  • 59prostate gland
  • 56placenta
  • 52adrenal gland
  • 43penis
  • 42ureter
  • 41eye
  • 41lymph node
  • 38thymus
  • 36gonad
  • 33spinal cord
  • 31esophagus
  • 23spleen
  • 19nerve
  • 19testis
  • 18lymphatic vessel
  • 18lymphoid tissue
  • 17ovary
  • 17thyroid gland
  • 14mouth
  • 13pituitary gland
  • 11bronchus
  • 10bone marrow
  • 9breast
  • 9skeleton
  • 8urinary bladder
  • 8vagina
  • 7tongue
  • 4trachea
  • 3nose
  • 1pericardium
Project
  • 8476AMP
  • 281KPMP
  • 111ENCODE
  • 31T1D
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 5259hg19
  • 1517GRCh38
  • 4hg18
annotation_type!
  • accessible chromatin
software_used.software.name!
  • encode-ccres
BIOSAMPLE
TYPE

8917 results

search-icontable-tab-icon
Clear Filters
pQTL
target gene predictions
histone modifications
chromatin state
candidate regulatory elements
binding sites
gene expression
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart2012119132
stomach211191911
brain16318161121
kidney14216141711
cell line
HeLa-S355331
A54919118182
H1-hESC3911128
K562231762
MCF-762553
primary cell
monocyte2861154121
common myeloid progenitor, CD34-positive141313
CD8-positive, alpha-beta T cell53013
B cell108112
CD14-positive monocyte1944
in vitro differentiated cells
neural progenitor cell515447
hematopoietic multipotent progenitor cell101101011
adipocyte616211
cardiomyocytes11
extended pluripotent stem (EPS) cells9
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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