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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 3018target gene predictions
  • 2638pQTL
  • 1709candidate regulatory elements
  • accessible chromatin
  • 977histone modifications
  • 944chromatin state
  • 817binding sites
  • 685gene expression
  • 484differential activity
  • 141variant allelic effects
  • 72Fine-mapped variants
  • 60eQTL
  • 13caQTL
  • 5hQTL
  • 4sQTL
  • 3meQTL
  • 3other
  • 2variant to gene
  • 1representative DNase hypersensitivity sites
Date released
  • 2636February, 2025
  • 2578February, 2021
  • 2505September, 2022
  • 1661July, 2026
  • 363May, 2021
  • 320May, 2026
  • 319February, 2024
  • 286September, 2023
  • 128March, 2020
  • 111November, 2021
  • 101May, 2020
  • 101October, 2022
  • 98August, 2021
  • 64March, 2023
  • 63February, 2020
  • 38May, 2024
  • 35August, 2017
  • 35May, 2022
  • 30March, 2024
  • 28January, 2021
  • 24January, 2020
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 7February, 2023
  • 5October, 2019
  • 4March, 2026
  • 2January, 2018
  • 2November, 2019
  • 1August, 2020
  • 1August, 2022
  • 1January, 2022
  • 1July, 2020
  • 1November, 2020
Available data
  • 6734bed bed3+
  • 3525tsv
  • 869bed bed9
  • 112txt
  • 40bigBed bed9
  • 34bed bed9+
  • 24csv
  • 18bigWig
  • 7bigBed narrowPeak
  • 1bam
Organism
  • 11573Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2499EpiMap
  • 1559ChIP-Atlas
  • 1458ENCODE-rE2G
  • 960ENCODE
  • 564DGA
  • 320pyxis
  • 284AMP
  • 281KPMP
  • 270T1D
  • 206BLUEPRINT
  • 203HDMA
  • 1744DN
  • 151GTEx
  • 151T2DKP
  • 132 T2DKP
  • 55HPAP
  • 26FNIH_projects-heart
  • 18CMDGA
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 5690tissue
  • 3049primary cell
  • 2386cell line
  • 445in vitro differentiated cells
  • 4stem cell
Organ
  • 3353blood
  • 2863vasculature
  • 2841bodily fluid
  • 2832blood vessel
  • 2657vein
  • 736epithelium
  • 705kidney
  • 693brain
  • 443heart
  • 417connective tissue
  • 406lung
  • 343musculature of body
  • 334intestine
  • 261skin of body
  • 244pancreas
  • 222limb
  • 214large intestine
  • 203embryo
  • 201liver
  • 164extraembryonic component
  • 132adipose tissue
  • 131stomach
  • 97mammary gland
  • 93small intestine
  • 92placenta
  • 90adrenal gland
  • 89bone element
  • 89muscle organ
  • 89uterus
  • 82eye
  • 81prostate gland
  • 74artery
  • 74thymus
  • 69ureter
  • 61penis
  • 60__MARKER__
  • 56gonad
  • 54lymph node
  • 48spleen
  • 46spinal cord
  • 41esophagus
  • 36thyroid gland
  • 29ovary
  • 27testis
  • 22lymphoid tissue
  • 21nerve
  • 19mouth
  • 17lymphatic vessel
  • 14skeleton
  • 13breast
  • 13bronchus
  • 12pituitary gland
  • 12urinary bladder
  • 11bone marrow
  • 11tongue
  • 11vagina
  • 4trachea
  • 3nose
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 11135AMP
  • 281KPMP
  • 111ENCODE
  • 31T1D
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 6091hg19
  • 3076GRCh38
  • 4hg18
annotation_type!
  • accessible chromatin
software_used.software.name!
  • qTLtools
BIOSAMPLE
TYPE

11576 results

search-icontable-tab-icon
Clear Filters
target gene predictions
pQTL
candidate regulatory elements
histone modifications
chromatin state
binding sites
gene expression
differential activity
variant allelic effects
Fine-mapped variants
eQTL
caQTL
hQTL
sQTL
meQTL
other
variant to gene
representative DNase hypersensitivity sites
tissue
whole blood26351
heart38371211412
stomach42401191
head of caudate nucleus86
kidney28292161711
primary cell
monocyte28611541211
CD8-positive, alpha-beta T cell2773013
T-cell644
common myeloid progenitor, CD34-positive262713
CD4-positive, alpha-beta T cell5283
cell line
A54933211182
HeLa-S359531
H1-hESC3911128
K562307172
MCF-7139253
in vitro differentiated cells
hematopoietic multipotent progenitor cell221911011
neural progenitor cell651547
adipocyte741611
cardiomyocytes11
mesenchymal stem cell43121
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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