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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2638pQTL
  • 1709candidate regulatory elements
  • 1357target gene predictions
  • 977histone modifications
  • 944chromatin state
  • accessible chromatin
  • 817binding sites
  • 689gene expression
  • 172differential activity
  • 141variant allelic effects
  • 72Fine-mapped variants
  • 60eQTL
  • 13caQTL
  • 5hQTL
  • 4sQTL
  • 3meQTL
  • 3other
  • 2variant to gene
  • 1representative DNase hypersensitivity sites
Date released
  • 2636February, 2025
  • 2578February, 2021
  • 2505September, 2022
  • 363May, 2021
  • 324February, 2024
  • 286September, 2023
  • 128March, 2020
  • 111November, 2021
  • 101May, 2020
  • 101October, 2022
  • 98August, 2021
  • 64March, 2023
  • 63February, 2020
  • 38May, 2024
  • 35August, 2017
  • 35May, 2022
  • 30March, 2024
  • 28January, 2021
  • 24January, 2020
  • 11March, 2025
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 7February, 2023
  • 5October, 2019
  • 2January, 2018
  • 2November, 2019
  • 1August, 2020
  • 1August, 2022
  • 1January, 2022
  • 1July, 2020
  • 1November, 2020
Available data
  • 5073bed bed3+
  • 3541tsv
  • 869bed bed9
  • 108txt
  • 40bigBed bed9
  • 34bed bed9+
  • 24csv
  • 18bigWig
  • 7bigBed narrowPeak
  • 1bam
Organism
  • 9604Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2499EpiMap
  • 1559ChIP-Atlas
  • 960ENCODE
  • 564DGA
  • 284AMP
  • 281KPMP
  • 270T1D
  • 206BLUEPRINT
  • 1744DN
  • 151GTEx
  • 151T2DKP
  • 132 T2DKP
  • 55HPAP
  • 26FNIH_projects-heart
  • 18CMDGA
  • 16STARNET
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 5038tissue
  • 2179cell line
  • 1983primary cell
  • 401in vitro differentiated cells
  • 4stem cell
Organ
  • 2868vasculature
  • 2841bodily fluid
  • 2830blood
  • 2813blood vessel
  • 2656vein
  • 745epithelium
  • 601kidney
  • 408brain
  • 375connective tissue
  • 346musculature of body
  • 295lung
  • 265intestine
  • 228heart
  • 222limb
  • 203embryo
  • 202pancreas
  • 188skin of body
  • 162large intestine
  • 136extraembryonic component
  • 135liver
  • 110stomach
  • 83adipose tissue
  • 80mammary gland
  • 80small intestine
  • 79uterus
  • 74bone element
  • 72prostate gland
  • 68placenta
  • 65adrenal gland
  • 62artery
  • 61penis
  • 60ureter
  • 54lymph node
  • 49eye
  • 47thymus
  • 42gonad
  • 40spinal cord
  • 38esophagus
  • 31spleen
  • 22lymphoid tissue
  • 22testis
  • 21nerve
  • 20lymphatic vessel
  • 20ovary
  • 20thyroid gland
  • 17mouth
  • 13bronchus
  • 12pituitary gland
  • 11bone marrow
  • 11breast
  • 10skeleton
  • 9tongue
  • 9urinary bladder
  • 9vagina
  • 4trachea
  • 3nose
  • 1pericardium
Project
  • 9170AMP
  • 281KPMP
  • 111ENCODE
  • 31T1D
  • 9community
  • 5ITG
Genome assembly (visualization)
  • 6091hg19
  • 1415GRCh38
  • 4hg18
annotation_type!
  • accessible chromatin
software_used.software.name!
  • qTLtools
BIOSAMPLE
TYPE

9607 results

search-icontable-tab-icon
Clear Filters
pQTL
candidate regulatory elements
target gene predictions
histone modifications
chromatin state
binding sites
gene expression
differential activity
variant allelic effects
Fine-mapped variants
eQTL
caQTL
hQTL
sQTL
meQTL
other
variant to gene
representative DNase hypersensitivity sites
tissue
whole blood26351
heart3720121132
stomach40211191
kidney29142161711
brain2916318111
cell line
HeLa-S355531
A54921191182
H1-hESC1391128
K562723172
MCF-796253
primary cell
monocyte2861151211
common myeloid progenitor, CD34-positive271413
CD8-positive, alpha-beta T cell753013
B cell171082
CD4-positive, alpha-beta memory T cell1499
in vitro differentiated cells
hematopoietic multipotent progenitor cell191011011
neural progenitor cell551547
adipocyte461611
cardiomyocytes11
mesenchymal stem cell33121
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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