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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2637pQTL
  • 2185target gene predictions
  • accessible chromatin
  • 977histone modifications
  • 944chromatin state
  • 876candidate regulatory elements
  • 817binding sites
  • 442differential activity
  • 177eQTL
  • 141variant allelic effects
  • 74Fine-mapped variants
  • 25caQTL
  • 11gene expression
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2636February, 2025
  • 2402February, 2021
  • 1661July, 2026
  • 840September, 2022
  • 320May, 2026
  • 273May, 2021
  • 258February, 2024
  • 117March, 2020
  • 115September, 2023
  • 111November, 2021
  • 102January, 2022
  • 101May, 2020
  • 101October, 2022
  • 45August, 2021
  • 40May, 2024
  • 35August, 2017
  • 35May, 2022
  • 28January, 2021
  • 26February, 2020
  • 21July, 2025
  • 15March, 2023
  • 9May, 2019
  • 8April, 2019
  • 7February, 2023
  • 7January, 2020
  • 5October, 2019
  • 4March, 2026
  • 2January, 2025
  • 2November, 2019
  • 1August, 2020
  • 1August, 2022
Available data
  • 5172bed bed3+
  • 2878tsv
  • 869bed bed9
  • 40bigBed bed9
  • 34bed bed9+
  • 18bigWig
  • 7bigBed narrowPeak
  • 4txt
  • 2csv
  • 1bam
Organism
  • 9326Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 1559ChIP-Atlas
  • 1458ENCODE-rE2G
  • 932ENCODE
  • 833EpiMap
  • 362DGA
  • 320pyxis
  • 277T1D
  • 203HDMA
  • 175AMP
  • 1744DN
  • 168BLUEPRINT
  • 147T2DKP
  • 110KPMP
  • 101T2D
  • 101eQTLCatalogue
  • 96GTEx
  • 94 T2DKP
  • 26FNIH_projects-heart
  • 24CMDGA
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 4722tissue
  • 2283primary cell
  • 2017cell line
  • 301in vitro differentiated cells
  • 4stem cell
Organ
  • 3306blood
  • 2789bodily fluid
  • 2783vasculature
  • 2773blood vessel
  • 2652vein
  • 571brain
  • 372epithelium
  • 354kidney
  • 353heart
  • 294connective tissue
  • 266lung
  • 224intestine
  • 208musculature of body
  • 194skin of body
  • 155liver
  • 148large intestine
  • 148pancreas
  • 139embryo
  • 127limb
  • 106adipose tissue
  • 99extraembryonic component
  • 89muscle organ
  • 84stomach
  • 80uterus
  • 69mammary gland
  • 64eye
  • 62adrenal gland
  • 61placenta
  • 60__MARKER__
  • 59bone element
  • 57artery
  • 56small intestine
  • 55prostate gland
  • 52thymus
  • 43ureter
  • 41gonad
  • 41penis
  • 38lymph node
  • 36spleen
  • 30spinal cord
  • 28esophagus
  • 28thyroid gland
  • 21ovary
  • 20testis
  • 14nerve
  • 12pituitary gland
  • 11lymphoid tissue
  • 11mouth
  • 10lymphatic vessel
  • 10skeleton
  • 9bone marrow
  • 9breast
  • 9bronchus
  • 7urinary bladder
  • 7vagina
  • 6tongue
  • 4trachea
  • 1embryonic structure
  • 1gallbladder
  • 1nose
Project
  • 9055AMP
  • 111ENCODE
  • 110KPMP
  • 31T1D
  • 17community
  • 5ITG
Genome assembly (visualization)
  • 4415hg19
  • 3178GRCh38
  • 4hg18
annotation_type!
  • accessible chromatin
software_used.software.name!
  • r
BIOSAMPLE
TYPE

9329 results

search-icontable-tab-icon
Clear Filters
pQTL
target gene predictions
histone modifications
chromatin state
candidate regulatory elements
binding sites
differential activity
eQTL
variant allelic effects
Fine-mapped variants
caQTL
gene expression
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood2635
head of caudate nucleus86
stomach23119211
heart19121181121
dorsolateral prefrontal cortex571
primary cell
monocyte286144121
T-cell644
CD8-positive, alpha-beta T cell273017
CD4-positive, alpha-beta T cell5238
endothelial cell1713225223
cell line
HeLa-S356321
H1-hESC38112
A5491511832
K562241712
MCF-782543
in vitro differentiated cells
hematopoietic multipotent progenitor cell1211091
neural progenitor cell21541
adipocyte51621
T-cell acute lymphoblastic leukemia53
embryonic stem cell1151
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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