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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2639pQTL
  • 977histone modifications
  • 944chromatin state
  • accessible chromatin
  • 876candidate regulatory elements
  • 817binding sites
  • 524target gene predictions
  • 186eQTL
  • 141variant allelic effects
  • 130differential activity
  • 84Fine-mapped variants
  • 15gene expression
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 2402February, 2021
  • 840September, 2022
  • 273May, 2021
  • 263February, 2024
  • 117March, 2020
  • 115September, 2023
  • 111November, 2021
  • 102January, 2022
  • 101May, 2020
  • 101October, 2022
  • 45August, 2021
  • 40May, 2024
  • 38March, 2025
  • 35August, 2017
  • 35May, 2022
  • 28January, 2021
  • 26February, 2020
  • 15March, 2023
  • 9May, 2019
  • 8April, 2019
  • 7February, 2023
  • 7January, 2020
  • 5October, 2019
  • 2January, 2025
  • 2November, 2019
  • 1August, 2020
  • 1August, 2022
Available data
  • 3511bed bed3+
  • 2903tsv
  • 869bed bed9
  • 40bigBed bed9
  • 34bed bed9+
  • 18bigWig
  • 7bigBed narrowPeak
  • 2csv
  • 1bam
Organism
  • 7366Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 1559ChIP-Atlas
  • 932ENCODE
  • 833EpiMap
  • 362DGA
  • 277T1D
  • 175AMP
  • 1744DN
  • 168BLUEPRINT
  • 147T2DKP
  • 110KPMP
  • 101T2D
  • 101eQTLCatalogue
  • 96GTEx
  • 94 T2DKP
  • 43STARNET
  • 26FNIH_projects-heart
  • 24CMDGA
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 4094tissue
  • 1810cell line
  • 1202primary cell
  • 257in vitro differentiated cells
  • 4stem cell
Organ
  • 2795bodily fluid
  • 2794vasculature
  • 2789blood
  • 2760blood vessel
  • 2651vein
  • 379epithelium
  • 286brain
  • 257connective tissue
  • 250kidney
  • 206musculature of body
  • 155intestine
  • 155lung
  • 139embryo
  • 138heart
  • 127limb
  • 121skin of body
  • 106pancreas
  • 96large intestine
  • 92liver
  • 71extraembryonic component
  • 70uterus
  • 63adipose tissue
  • 63stomach
  • 52mammary gland
  • 48artery
  • 46prostate gland
  • 43small intestine
  • 42bone element
  • 41penis
  • 38lymph node
  • 37adrenal gland
  • 37placenta
  • 34ureter
  • 31eye
  • 27gonad
  • 25esophagus
  • 25thymus
  • 24spinal cord
  • 19spleen
  • 15testis
  • 14nerve
  • 13lymphatic vessel
  • 12ovary
  • 12pituitary gland
  • 12thyroid gland
  • 11lymphoid tissue
  • 9bone marrow
  • 9bronchus
  • 9mouth
  • 7breast
  • 5vagina
  • 4skeleton
  • 4tongue
  • 4trachea
  • 4urinary bladder
  • 1nose
Project
  • 7099AMP
  • 111ENCODE
  • 110KPMP
  • 31T1D
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 4415hg19
  • 1517GRCh38
  • 4hg18
annotation_type!
  • accessible chromatin
software_used.software.name!
  • r
BIOSAMPLE
TYPE

7369 results

search-icontable-tab-icon
Clear Filters
pQTL
histone modifications
chromatin state
candidate regulatory elements
binding sites
target gene predictions
eQTL
variant allelic effects
differential activity
Fine-mapped variants
gene expression
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood2635
heart12118112
stomach1192121
brain31813121
kidney21615111
cell line
HeLa-S332152
H1-hESC11238
K562171217
A549118321
breast cancer cell119
primary cell
monocyte86124121
CD8-positive, alpha-beta T cell30175
common myeloid progenitor, CD34-positive13141
CD14-positive monocyte4415
macrophage339311
in vitro differentiated cells
hematopoietic multipotent progenitor cell11091
neural progenitor cell15411
adipocyte16214
T-cell acute lymphoblastic leukemia53
embryonic stem cell1511
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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