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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
candidate regulatory elements
583
target gene predictions
555
chromatin state
265
accessible chromatin
184
gene expression
183
histone modifications
115
eQTL
74
Fine-mapped variants
binding sites
54
variant allelic effects
5
differential activity
4
variant to gene
3
pQTL
2
sQTL
1
caQTL
1
other
1
representative DNase hypersensitivity sites
Date released
989
September, 2022
235
February, 2021
113
March, 2020
84
June, 2020
77
August, 2021
70
May, 2021
67
May, 2020
65
January, 2020
59
January, 2022
57
February, 2024
48
February, 2020
35
November, 2022
28
March, 2024
26
February, 2023
23
August, 2017
12
November, 2019
9
May, 2019
8
April, 2019
7
October, 2019
6
March, 2023
4
September, 2023
3
September, 2018
2
January, 2018
May, 2022
1
August, 2020
1
August, 2022
Available data
1105
bed bed3+
526
bed bed9
287
tsv
132
bigWig
36
bigBed bed9
24
csv
1
bam
Organism
2028
Homo sapiens
Biosample type
2003
primary cell
1677
tissue
1375
cell line
353
in vitro differentiated cells
4
stem cell
Organ
267
brain
171
musculature of body
169
kidney
150
heart
143
limb
128
intestine
115
connective tissue
94
pancreas
92
lung
74
large intestine
69
epithelium
67
vasculature
66
blood vessel
65
adipose tissue
65
eye
57
extraembryonic component
57
stomach
45
liver
43
small intestine
37
embryo
36
artery
34
adrenal gland
33
placenta
33
ureter
27
thymus
23
gonad
22
spinal cord
20
esophagus
19
nerve
19
skin of body
18
bone element
18
spleen
14
skeleton
13
ovary
12
thyroid gland
10
lymphoid tissue
10
testis
9
prostate gland
8
breast
8
uterus
7
mouth
7
urinary bladder
6
tongue
6
vagina
5
penis
4
bodily fluid
3
blood
3
mammary gland
3
nose
3
pituitary gland
1
lymphatic vessel
1
vein
Project
2025
AMP
5
ITG
Genome assembly (visualization)
1753
hg19
799
GRCh38
3
hg18
annotation_type!
binding sites
candidate regulatory elements
month_released!
May, 2022
BIOSAMPLE
TYPE
2030 results
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Clear Filters
target gene predictions
chromatin state
accessible chromatin
gene expression
histone modifications
eQTL
Fine-mapped variants
variant allelic effects
differential activity
variant to gene
pQTL
sQTL
caQTL
other
representative DNase hypersensitivity sites
tissue
heart
20
21
5
3
1
2
kidney
14
16
10
7
2
1
1
stomach
21
19
3
1
1
1
brain
16
18
2
1
3
2
1
islet of Langerhans
1
3
6
11
1
13
2
1
2
2
+ See 247 more…
in vitro differentiated cells
neural progenitor cell
5
4
10
7
15
hematopoietic multipotent progenitor cell
10
10
1
1
1
adipocyte
6
6
4
1
1
embryonic stem cell
1
5
6
1
cardiomyocytes
11
+ See 114 more…
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