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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
candidate regulatory elements
44
target gene predictions
chromatin state
10
accessible chromatin
binding sites
5
histone modifications
2
eQTL
Date released
65
September, 2022
41
February, 2021
7
June, 2020
6
November, 2021
5
May, 2021
3
February, 2024
2
January, 2022
1
March, 2020
Available data
128
bed bed3+
3
bigWig
tsv
Organism
130
Homo sapiens
Biosample type
99
tissue
25
cell line
6
primary cell
Organ
529
epithelium
317
kidney
316
connective tissue
311
brain
280
musculature of body
230
lung
221
intestine
179
pancreas
175
limb
170
heart
164
embryo
149
skin of body
148
vasculature
144
bodily fluid
136
blood
130
large intestine
113
blood vessel
110
extraembryonic component
98
liver
93
stomach
92
eye
73
uterus
64
small intestine
62
bone element
60
mammary gland
58
adrenal gland
56
prostate gland
55
adipose tissue
54
placenta
51
ureter
47
penis
45
artery
42
lymph node
37
gonad
thymus
36
esophagus
28
spinal cord
26
spleen
18
lymphoid tissue
18
ovary
18
testis
18
thyroid gland
15
nerve
15
skeleton
14
mouth
14
vein
12
bronchus
12
lymphatic vessel
12
pituitary gland
10
breast
9
bone marrow
7
tongue
7
urinary bladder
7
vagina
3
nose
3
trachea
1
pericardium
Project
124
AMP
6
ENCODE
Genome assembly (visualization)
128
hg19
10
GRCh38
annotation_type!
binding sites
chromatin state
files.file_type!
tsv
organ_slims!
thymus
BIOSAMPLE
TYPE
130 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
histone modifications
eQTL
tissue
large intestine
27
14
1
1
sigmoid colon
10
7
1
transverse colon
8
5
1
1
colonic mucosa
4
2
1
mucosa of rectum
4
2
+ See 4 more…
cell line
HT-29
2
2
1
1
HCT116
2
3
SW480
2
1
1
1
RKO
1
1
1
HCT-116 cell
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
3
See all biosamples
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