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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
253
gene expression
212
accessible chromatin
122
target gene predictions
110
candidate regulatory elements
differential activity
53
chromatin state
binding sites
41
variant allelic effects
histone modifications
3
eQTL
2
caQTL
Date released
150
September, 2022
140
February, 2021
127
November, 2021
93
September, 2023
70
February, 2024
34
May, 2021
25
June, 2020
20
August, 2021
20
January, 2021
15
May, 2020
15
November, 2022
14
January, 2020
11
February, 2023
10
May, 2024
9
February, 2020
9
March, 2023
7
April, 2020
6
August, 2018
6
March, 2020
5
October, 2019
3
August, 2017
2
March, 2024
2
May, 2022
1
July, 2020
1
November, 2019
1
October, 2022
Available data
486
bed bed3+
234
tsv
176
bigWig
78
txt
50
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
796
Homo sapiens
Biosample type
693
primary cell
56
tissue
26
cell line
21
in vitro differentiated cells
Organ
796
epithelium
583
kidney
402
brain
398
connective tissue
360
musculature of body
298
lung
275
intestine
246
heart
240
limb
233
pancreas
222
vasculature
191
embryo
173
skin of body
170
blood vessel
163
large intestine
147
bodily fluid
138
blood
138
extraembryonic component
127
liver
118
stomach
99
eye
84
adipose tissue
84
small intestine
77
uterus
75
bone element
73
adrenal gland
70
mammary gland
67
placenta
64
ureter
63
prostate gland
62
artery
52
penis
47
thymus
46
gonad
46
lymph node
45
esophagus
41
spinal cord
33
spleen
25
nerve
23
lymphoid tissue
23
ovary
23
thyroid gland
22
testis
19
lymphatic vessel
19
mouth
19
vein
18
skeleton
13
breast
13
bronchus
12
pituitary gland
10
tongue
10
urinary bladder
10
vagina
9
bone marrow
4
nose
1
pericardium
1
trachea
Project
549
AMP
127
ENCODE
93
KPMP
20
T1D
7
LungMap
Genome assembly (visualization)
539
hg19
234
GRCh38
annotation_type!
binding sites
differential activity
histone modifications
BIOSAMPLE
TYPE
796 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
chromatin state
variant allelic effects
eQTL
caQTL
primary cell
endothelial cell
9
15
7
3
2
1
2
hepatocyte
13
8
3
2
1
2
epithelial cell of proximal tubule
16
1
1
2
1
1
glomerular endothelial cell
14
2
1
2
1
1
foreskin keratinocyte
4
11
4
+ See 145 more…
tissue
pigmented layer of retina
20
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
pancreatic ductal cell
2
breast - mammary tissue
1
+ See 11 more…
cell line
EndoC_BH1
8
8
1
1
colon epithelial cell
1
1
1
glomerular visceral epithelial cell
1
1
choroid plexus epithelial cell
1
epithelial cell of prostate
1
+ See 1 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
1
2
1
hepatocyte(AFP)
3
pancreatic ductal cell
3
dermis microvascular lymphatic vessel endothelial cell
1
+ See 4 more…
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