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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1357
target gene predictions
976
histone modifications
903
accessible chromatin
binding sites
124
variant allelic effects
40
chromatin state
13
caQTL
10
eQTL
3
hQTL
2
meQTL
2
other
2
pQTL
2
variant to gene
sQTL
Date released
1691
February, 2021
1678
September, 2022
333
November, 2021
288
June, 2020
287
February, 2024
285
May, 2021
135
May, 2020
66
January, 2020
56
January, 2021
50
August, 2021
44
March, 2020
41
November, 2022
34
August, 2017
31
February, 2023
19
April, 2020
15
May, 2022
13
November, 2019
10
October, 2022
9
October, 2019
5
January, 2022
5
September, 2023
3
September, 2018
2
November, 2020
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
5105
bed bed3+
900
tsv
869
bed bed9
546
bigWig
108
txt
40
bigBed bed9
34
bed bed9+
24
csv
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
5059
Homo sapiens
Biosample type
1813
tissue
1495
primary cell
1482
cell line
309
in vitro differentiated cells
4
stem cell
Organ
504
epithelium
302
kidney
299
connective tissue
293
brain
274
musculature of body
230
lung
222
intestine
173
limb
168
heart
165
embryo
153
pancreas
147
skin of body
144
bodily fluid
142
vasculature
136
blood
131
large intestine
109
extraembryonic component
107
blood vessel
93
stomach
92
eye
88
liver
72
uterus
64
small intestine
62
bone element
61
mammary gland
57
adrenal gland
55
prostate gland
53
placenta
51
ureter
47
adipose tissue
47
penis
42
lymph node
40
artery
37
thymus
34
gonad
33
esophagus
27
spinal cord
25
spleen
18
lymphoid tissue
17
ovary
17
thyroid gland
16
testis
15
skeleton
14
nerve
14
vein
13
mouth
12
bronchus
12
lymphatic vessel
11
pituitary gland
9
bone marrow
9
breast
7
tongue
7
urinary bladder
6
vagina
3
nose
3
trachea
Project
4692
AMP
333
ENCODE
60
T1D
19
LungMap
1
ITG
Genome assembly (visualization)
5098
hg19
794
GRCh38
annotation_type!
binding sites
sQTL
BIOSAMPLE
TYPE
5105 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
variant allelic effects
chromatin state
caQTL
eQTL
hQTL
meQTL
other
pQTL
variant to gene
tissue
heart
37
20
1
5
2
stomach
40
21
1
3
kidney
29
14
2
10
1
1
brain
29
16
3
2
1
muscle of arm
33
16
1
1
+ See 210 more…
primary cell
monocyte
2
86
18
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
common myeloid progenitor, CD34-positive
27
14
B cell
14
10
6
endothelial cell
7
1
15
2
2
1
+ See 324 more…
cell line
HeLa-S3
5
55
A549
21
19
1
1
H1-hESC
1
39
1
1
K562
7
23
1
1
1
HFFc6
19
+ See 625 more…
in vitro differentiated cells
neural progenitor cell
5
5
14
10
hematopoietic multipotent progenitor cell
19
10
1
1
adipocyte
4
6
1
4
4
mesenchymal stem cell
3
3
1
1
embryonic stem cell
1
1
5
+ See 102 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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