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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
255
gene expression
219
accessible chromatin
178
candidate regulatory elements
target gene predictions
92
differential activity
88
chromatin state
binding sites
41
variant allelic effects
33
histone modifications
5
eQTL
2
caQTL
Date released
203
February, 2021
165
September, 2022
155
September, 2023
78
November, 2021
71
February, 2024
38
March, 2023
32
June, 2020
24
May, 2021
23
August, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
10
January, 2021
10
May, 2024
9
February, 2020
7
April, 2020
6
August, 2017
6
August, 2018
5
October, 2019
4
March, 2020
4
March, 2024
2
January, 2022
2
May, 2022
1
July, 2020
1
November, 2019
1
October, 2022
Available data
475
bed bed3+
326
tsv
173
bigWig
82
bed bed9
78
txt
11
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
913
Homo sapiens
Biosample type
685
primary cell
154
tissue
52
cell line
22
in vitro differentiated cells
Organ
794
epithelium
570
kidney
374
brain
359
connective tissue
288
musculature of body
228
pancreas
224
lung
217
vasculature
210
intestine
203
heart
193
limb
163
blood vessel
142
skin of body
124
large intestine
124
liver
118
embryo
115
bodily fluid
107
blood
107
extraembryonic component
94
eye
89
stomach
74
adipose tissue
65
bone element
61
artery
61
small intestine
56
mammary gland
55
prostate gland
53
placenta
52
adrenal gland
51
ureter
46
penis
41
lymph node
36
gonad
35
esophagus
34
thymus
32
spinal cord
25
spleen
22
nerve
21
uterus
19
lymphatic vessel
19
testis
18
lymphoid tissue
17
thyroid gland
16
ovary
16
vein
15
mouth
15
skeleton
11
bronchus
10
breast
8
bone marrow
8
tongue
8
vagina
7
urinary bladder
3
nose
3
pituitary gland
3
trachea
1
pericardium
Project
661
AMP
155
KPMP
78
ENCODE
10
T1D
7
LungMap
2
community
Genome assembly (visualization)
560
hg19
223
GRCh38
annotation_type!
binding sites
target gene predictions
BIOSAMPLE
TYPE
913 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
differential activity
chromatin state
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
15
3
2
1
1
2
hepatocyte
13
8
2
1
2
4
epithelial cell of proximal tubule
16
1
2
1
1
glomerular endothelial cell
14
2
2
1
1
foreskin keratinocyte
11
4
+ See 144 more…
tissue
large intestine
1
27
13
1
pigmented layer of retina
20
sigmoid colon
1
10
5
transverse colon
1
8
4
1
esophagus squamous epithelium
1
6
2
+ See 25 more…
cell line
EndoC_BH1
8
8
3
1
HT-29
1
2
1
1
SW480
1
2
1
1
HCT116
2
1
RKO
1
1
1
+ See 12 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
hepatocyte(AFP)
3
pancreatic ductal cell
3
foreskin keratinocyte
1
1
+ See 4 more…
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