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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
25
candidate regulatory elements
21
target gene predictions
19
gene expression
18
accessible chromatin
17
chromatin state
14
histone modifications
8
eQTL
binding sites
variant allelic effects
3
Fine-mapped variants
1
caQTL
1
differential activity
Date released
46
September, 2022
21
February, 2021
14
February, 2024
10
March, 2020
9
August, 2021
5
June, 2020
3
August, 2017
3
January, 2020
3
May, 2021
3
November, 2021
2
February, 2020
2
May, 2022
2
May, 2024
1
January, 2022
1
July, 2020
1
November, 2019
1
September, 2018
Available data
81
bed bed3+
20
tsv
17
bigWig
14
bed bed9
3
csv
1
bam
1
bigBed bed9
Organism
127
Homo sapiens
Biosample type
57
tissue
40
primary cell
23
cell line
7
in vitro differentiated cells
Organ
875
epithelium
629
kidney
433
brain
421
connective tissue
361
musculature of body
301
lung
280
intestine
261
pancreas
242
heart
234
limb
233
vasculature
202
embryo
185
skin of body
blood vessel
172
bodily fluid
168
large intestine
162
blood
143
extraembryonic component
141
liver
117
stomach
101
eye
84
adipose tissue
84
small intestine
81
bone element
79
uterus
74
mammary gland
72
adrenal gland
70
placenta
69
prostate gland
65
artery
61
ureter
57
penis
50
lymph node
48
thymus
47
gonad
43
esophagus
41
spinal cord
33
spleen
24
lymphoid tissue
23
nerve
23
ovary
23
testis
22
lymphatic vessel
22
thyroid gland
19
mouth
19
vein
18
skeleton
13
breast
13
bronchus
13
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
4
nose
3
trachea
1
pericardium
Project
124
AMP
3
ENCODE
Genome assembly (visualization)
105
hg19
46
GRCh38
1
hg18
annotation_type!
binding sites
variant allelic effects
organ_slims!
blood vessel
BIOSAMPLE
TYPE
127 results
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Clear Filters
candidate regulatory elements
target gene predictions
gene expression
accessible chromatin
chromatin state
histone modifications
eQTL
Fine-mapped variants
caQTL
differential activity
tissue
liver
13
10
1
4
9
2
7
1
1
right lobe of liver
2
1
1
1
1
3
primary cell
hepatocyte
2
3
13
8
1
4
hepatic stellate cell
2
1
1
3
1
1
cell line
HepG2
2
3
2
2
5
HuH-7
1
1
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
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