Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
57
candidate regulatory elements
33
target gene predictions
binding sites
11
histone modifications
10
accessible chromatin
10
gene expression
1
chromatin state
Date released
54
September, 2022
41
February, 2021
10
June, 2020
8
August, 2021
7
May, 2021
1
August, 2017
1
March, 2020
Available data
112
bed bed3+
10
tsv
Organism
122
Homo sapiens
Biosample type
56
cell line
26
tissue
24
in vitro differentiated cells
15
primary cell
1
stem cell
Organ
678
epithelium
540
kidney
307
connective tissue
298
brain
272
musculature of body
222
lung
209
pancreas
204
intestine
164
limb
164
vasculature
157
heart
139
skin of body
125
large intestine
122
embryo
blood vessel
119
bodily fluid
111
blood
106
extraembryonic component
89
liver
87
eye
86
stomach
64
adipose tissue
60
small intestine
58
bone element
56
prostate gland
55
mammary gland
51
placenta
48
adrenal gland
48
ureter
47
penis
42
lymph node
41
artery
36
thymus
34
gonad
31
esophagus
28
spinal cord
25
spleen
21
uterus
18
lymphoid tissue
17
testis
16
ovary
16
thyroid gland
15
vein
14
lymphatic vessel
14
mouth
14
nerve
12
pituitary gland
10
breast
10
bronchus
9
bone marrow
8
tongue
8
urinary bladder
7
skeleton
7
vagina
3
nose
3
trachea
1
pericardium
Project
122
AMP
Genome assembly (visualization)
192
hg19
GRCh38
annotation_type!
binding sites
variant to gene
assembly!
GRCh38
organ_slims!
blood vessel
BIOSAMPLE
TYPE
122 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
gene expression
chromatin state
cell line
H1-hESC
1
2
1
1
8
H9
7
2
H7-hESC
1
2
1
1
H4
2
1
1
HUES6
2
1
1
+ See 11 more…
tissue
chorionic villus
8
4
trophoblast
4
3
1
embryonic facial prominence
1
1
1
cardiogenic mesoderm
1
first pancreatic bud
1
+ See 1 more…
in vitro differentiated cells
endodermal cell
4
2
mesodermal cell
4
1
1
trophoblast cell
2
2
ectodermal cell
2
1
cardiac mesoderm primordium
1
1
+ See 3 more…
primary cell
trophoblast cell
7
5
1
1
primordial germ cell
1
stem cell
H1-hESC
1
See all biosamples
Download