Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
917
candidate regulatory elements
503
target gene predictions
497
chromatin state
177
accessible chromatin
97
eQTL
97
gene expression
87
histone modifications
69
Fine-mapped variants
45
variant allelic effects
binding sites
5
differential activity
2
caQTL
2
variant to gene
1
other
1
pQTL
Date released
1346
September, 2022
587
February, 2021
96
March, 2020
60
June, 2020
58
January, 2020
55
May, 2020
52
January, 2022
46
February, 2020
33
August, 2021
28
March, 2024
26
February, 2023
26
May, 2021
17
November, 2022
16
August, 2017
16
February, 2024
9
May, 2019
9
November, 2019
7
April, 2019
4
October, 2019
3
September, 2018
2
May, 2022
1
August, 2020
1
August, 2022
1
January, 2018
Available data
1747
bed bed3+
476
bed bed9
195
tsv
104
bigWig
29
bigBed bed9
1
bam
Organism
2498
Homo sapiens
Biosample type
2500
tissue
2246
primary cell
1676
cell line
429
in vitro differentiated cells
4
stem cell
Organ
344
brain
305
musculature of body
297
kidney
235
limb
231
intestine
213
heart
180
lung
133
large intestine
pancreas
108
stomach
97
extraembryonic component
90
connective tissue
84
blood vessel
84
vasculature
83
adipose tissue
80
small intestine
69
eye
64
ureter
62
adrenal gland
59
epithelium
59
placenta
57
liver
47
thymus
42
artery
38
gonad
36
spinal cord
35
esophagus
33
embryo
33
spleen
25
nerve
23
skin of body
22
bone element
21
ovary
20
thyroid gland
18
lymphoid tissue
18
skeleton
17
testis
13
breast
13
prostate gland
11
mouth
11
uterus
10
tongue
10
urinary bladder
10
vagina
4
bodily fluid
3
blood
3
pituitary gland
1
mammary gland
1
penis
1
vein
Project
2500
AMP
ITG
Genome assembly (visualization)
2329
hg19
700
GRCh38
3
hg18
annotation_type!
binding sites
award.project!
ITG
organ_slims!
pancreas
organ_slims!!
pancreas
BIOSAMPLE
TYPE
2500 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
eQTL
gene expression
histone modifications
Fine-mapped variants
variant allelic effects
differential activity
caQTL
variant to gene
other
pQTL
tissue
heart
37
20
21
5
3
1
2
stomach
40
21
19
3
1
1
1
kidney
29
14
16
10
1
7
2
1
brain
29
16
18
2
2
1
3
1
lung
33
17
16
1
1
+ See 243 more…
See all biosamples
Download