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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 3013target gene predictions
  • 2638pQTL
  • 1671candidate regulatory elements
  • 1186accessible chromatin
  • 977histone modifications
  • 944chromatin state
  • binding sites
  • 632gene expression
  • 484differential activity
  • 165eQTL
  • 141variant allelic effects
  • 74Fine-mapped variants
  • 8caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2636February, 2025
  • 2511September, 2022
  • 1984July, 2026
  • 1865February, 2021
  • 389May, 2021
  • 333November, 2021
  • 320February, 2024
  • 320May, 2026
  • 289June, 2020
  • 281September, 2023
  • 155May, 2020
  • 127March, 2020
  • 106January, 2022
  • 89January, 2020
  • 81August, 2021
  • 70March, 2023
  • 64February, 2020
  • 56January, 2021
  • 43May, 2022
  • 41November, 2022
  • 35August, 2017
  • 32February, 2023
  • 30March, 2024
  • 19April, 2020
  • 14November, 2019
  • 14October, 2019
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 5October, 2022
  • 4March, 2026
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 2January, 2025
  • 2May, 2024
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 7150bed bed3+
  • 3489tsv
  • 869bed bed9
  • 512bigWig
  • 87txt
  • 40bigBed bed9
  • 34bed bed9+
  • 26csv
  • 16bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 11908Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2499EpiMap
  • 1458ENCODE-rE2G
  • 1130ChIP-Atlas
  • 869ENCODE
  • 528DGA
  • 512AMP
  • 421T1D
  • 406T2DKP
  • 393HDMA
  • 320pyxis
  • 281KPMP
  • 219BLUEPRINT
  • 1744DN
  • 151GTEx
  • 141 T2DKP
  • 133CATlas
  • 111T2D
  • 101eQTLCatalogue
  • 97CMDGA
  • 67HPAP
  • 12ROADMAP
Biosample type
  • 5900tissue
  • 3666primary cell
  • 1916cell line
  • 469in vitro differentiated cells
  • 3stem cell
Organ
  • 3320blood
  • 2873vasculature
  • 2837blood vessel
  • 2807bodily fluid
  • 2656vein
  • 884brain
  • 863epithelium
  • 714kidney
  • 474connective tissue
  • 457heart
  • 431lung
  • 353musculature of body
  • 352intestine
  • 314pancreas
  • 278skin of body
  • 242limb
  • 220large intestine
  • 202embryo
  • 197liver
  • 171extraembryonic component
  • 155eye
  • 140adipose tissue
  • 140stomach
  • 111muscle organ
  • 102adrenal gland
  • 98bone element
  • 97small intestine
  • 94placenta
  • 92mammary gland
  • 92thymus
  • 89uterus
  • 82artery
  • 79prostate gland
  • 73ureter
  • 62spleen
  • 61gonad
  • 60__MARKER__
  • 57penis
  • 50lymph node
  • 48esophagus
  • 47spinal cord
  • 47thyroid gland
  • 32ovary
  • 28testis
  • 25nerve
  • 24lymphoid tissue
  • 24skeleton
  • 21mouth
  • 19lymphatic vessel
  • 15breast
  • 14bronchus
  • 13pituitary gland
  • 13urinary bladder
  • 12tongue
  • 12vagina
  • 11bone marrow
  • 4nose
  • 3trachea
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 11241AMP
  • 333ENCODE
  • 281KPMP
  • 60T1D
  • 19LungMap
  • 17community
  • 5ITG
Genome assembly (visualization)
  • 6073hg19
  • 3818GRCh38
  • 3hg18
annotation_type!
  • binding sites
award.rfa!
  • AMP2
BIOSAMPLE
TYPE

11956 results

search-icontable-tab-icon
Clear Filters
target gene predictions
pQTL
candidate regulatory elements
accessible chromatin
histone modifications
chromatin state
gene expression
differential activity
eQTL
variant allelic effects
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart38375121412
stomach4240311911
brain30292318121
head of caudate nucleus86
primary cell
monocyte218861544121
fibroblast28381026
CD8-positive, alpha-beta T cell27743012
endothelial cell1720152521
T-cell644
cell line
A54933211118
HeLa-S35953
H1-hESC3911118
K562307117
MCF-7139125
in vitro differentiated cells
hematopoietic multipotent progenitor cell221911101
neural progenitor cell65101547
adipocyte744161
embryonic stem cell1515
cardiomyocytes11
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
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