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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 1382candidate regulatory elements
  • 958target gene predictions
  • 753chromatin state
  • 750accessible chromatin
  • 668gene expression
  • 393histone modifications
  • 179eQTL
  • binding sites
  • 162differential activity
  • 137variant allelic effects
  • 84Fine-mapped variants
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 1969September, 2022
  • 1142February, 2021
  • 333November, 2021
  • 326May, 2021
  • 286September, 2023
  • 204February, 2024
  • 153May, 2020
  • 137June, 2020
  • 120March, 2020
  • 119August, 2021
  • 96January, 2022
  • 88January, 2020
  • 64February, 2020
  • 61March, 2023
  • 56January, 2021
  • 44November, 2022
  • 42May, 2022
  • 40May, 2024
  • 38March, 2025
  • 31February, 2023
  • 30August, 2017
  • 29March, 2024
  • 19April, 2020
  • 14October, 2019
  • 13November, 2019
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 8October, 2022
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 2January, 2025
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 3775bed bed3+
  • 3554tsv
  • 690bed bed9
  • 542bigWig
  • 108txt
  • 40bigBed bed9
  • 27bed bed9+
  • 26csv
  • 16bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 8094Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 1962EpiMap
  • 727ENCODE
  • 579DGA
  • 521AMP
  • 405T2DKP
  • 398ChIP-Atlas
  • 396T1D
  • 281KPMP
  • 212BLUEPRINT
  • 156 T2DKP
  • 150GTEx
  • 101T2D
  • 91eQTLCatalogue
  • 88CMDGA
  • 67HPAP
  • 43STARNET
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
  • 64DN
Biosample type
  • 5287tissue
  • 2417primary cell
  • cell line
  • 432in vitro differentiated cells
  • 4stem cell
Organ
  • 2885vasculature
  • 2828blood vessel
  • 2654vein
  • 2652bodily fluid
  • 2651blood
  • 880epithelium
  • 606kidney
  • 424connective tissue
  • 383brain
  • 357musculature of body
  • 254intestine
  • 245heart
  • 239pancreas
  • 236limb
  • 212lung
  • 140extraembryonic component
  • 139large intestine
  • 127liver
  • 123skin of body
  • 119stomach
  • 96eye
  • 95adipose tissue
  • 85embryo
  • 84small intestine
  • 73adrenal gland
  • 70artery
  • 67placenta
  • 64ureter
  • 48thymus
  • 45esophagus
  • 42gonad
  • 42mammary gland
  • 42penis
  • 40spinal cord
  • 34bone element
  • 33spleen
  • 25nerve
  • 23ovary
  • 23prostate gland
  • 23thyroid gland
  • 21lymphatic vessel
  • 18lymphoid tissue
  • 18skeleton
  • 18testis
  • 15mouth
  • 15uterus
  • 14bronchus
  • 13breast
  • 11bone marrow
  • 10tongue
  • 10urinary bladder
  • 10vagina
  • 4nose
  • 3pituitary gland
  • 3trachea
  • 1pericardium
Project
  • 7440AMP
  • 333ENCODE
  • 281KPMP
  • 60T1D
  • 19LungMap
  • 5ITG
  • 4community
Genome assembly (visualization)
  • 4518hg19
  • 1538GRCh38
  • 3hg18
annotation_type!
  • binding sites
biosample_type!
  • cell line
BIOSAMPLE
TYPE

8142 results

search-icontable-tab-icon
Clear Filters
pQTL
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
gene expression
histone modifications
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart3720215312
stomach4021193111
kidney291416107211
brain29161821321
primary cell
monocyte21815864121
common myeloid progenitor, CD34-positive271413
CD8-positive, alpha-beta T cell7514330
B cell1710862
endothelial cell371591122
in vitro differentiated cells
neural progenitor cell55410715
hematopoietic multipotent progenitor cell191010111
adipocyte466411
embryonic stem cell1561
cardiomyocytes11
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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