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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
24
accessible chromatin
23
candidate regulatory elements
17
gene expression
17
target gene predictions
16
chromatin state
14
histone modifications
binding sites
8
eQTL
4
differential activity
4
variant allelic effects
1
caQTL
Date released
43
September, 2022
20
February, 2021
20
February, 2024
March, 2020
9
August, 2021
5
June, 2020
5
November, 2021
4
March, 2023
3
August, 2017
3
January, 2020
3
May, 2020
3
May, 2021
2
February, 2020
2
May, 2022
2
May, 2024
1
January, 2022
1
July, 2020
1
November, 2019
1
September, 2018
Available data
84
bed bed3+
23
bigWig
22
tsv
13
bed bed9
1
bam
1
bigBed bed9
Organism
128
Homo sapiens
Biosample type
54
primary cell
52
tissue
22
cell line
in vitro differentiated cells
Organ
887
epithelium
641
kidney
408
brain
382
connective tissue
357
musculature of body
301
lung
281
intestine
261
pancreas
236
heart
235
vasculature
233
limb
180
skin of body
176
blood vessel
172
bodily fluid
171
embryo
167
large intestine
162
blood
138
extraembryonic component
128
liver
118
stomach
97
eye
83
small intestine
81
bone element
79
adipose tissue
79
uterus
73
mammary gland
72
adrenal gland
70
placenta
70
prostate gland
64
ureter
63
artery
53
penis
50
lymph node
47
thymus
46
gonad
44
esophagus
38
spinal cord
32
spleen
24
lymphoid tissue
23
testis
23
thyroid gland
22
nerve
22
ovary
21
lymphatic vessel
19
mouth
19
vein
18
skeleton
14
bronchus
13
breast
13
pituitary gland
11
bone marrow
10
tongue
10
vagina
9
urinary bladder
3
trachea
pericardium
Project
123
AMP
5
ENCODE
Genome assembly (visualization)
104
hg19
52
GRCh38
1
hg18
annotation_type!
binding sites
biosample_type!
in vitro differentiated cells
month_released!
March, 2020
organ_slims!
pericardium
BIOSAMPLE
TYPE
128 results
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Clear Filters
accessible chromatin
candidate regulatory elements
gene expression
target gene predictions
chromatin state
histone modifications
eQTL
differential activity
variant allelic effects
caQTL
primary cell
hepatocyte
8
2
9
3
1
4
2
endothelial cell of hepatic sinusoid
6
4
hepatic stellate cell
3
2
1
1
1
1
1
pancreatic endothelial cell
1
3
Liver fetal (hepatocyte)
1
tissue
liver
4
13
1
8
9
2
7
1
1
right lobe of liver
2
1
1
1
1
cell line
HepG2
2
2
2
2
5
HuH-7
1
1
1
1
1
HuH-7.5
1
1
1
hepatic stellate cell
1
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