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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 1630candidate regulatory elements
  • 1292target gene predictions
  • 900chromatin state
  • 883histone modifications
  • 844accessible chromatin
  • binding sites
  • 615gene expression
  • 189eQTL
  • 172differential activity
  • 135variant allelic effects
  • 84Fine-mapped variants
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
Date released
  • 2639February, 2025
  • 2406September, 2022
  • 1721February, 2021
  • 350May, 2021
  • 340February, 2024
  • 333November, 2021
  • 282September, 2023
  • 268June, 2020
  • 148May, 2020
  • 117March, 2020
  • 103January, 2022
  • 96August, 2021
  • 86January, 2020
  • 70March, 2023
  • 64February, 2020
  • 56January, 2021
  • 49May, 2022
  • 40May, 2024
  • 38March, 2025
  • 32February, 2023
  • 31August, 2017
  • 30March, 2024
  • 26November, 2022
  • 19April, 2020
  • 12November, 2019
  • 12October, 2019
  • 10October, 2022
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 2January, 2025
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 4958bed bed3+
  • 3501tsv
  • 829bed bed9
  • 534bigWig
  • 108txt
  • 35bigBed bed9
  • 34bed bed9+
  • 16bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
  • 2csv
Organism
  • 9371Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2394EpiMap
  • 1029ChIP-Atlas
  • 828ENCODE
  • 591DGA
  • 436AMP
  • 421T1D
  • 402T2DKP
  • 281KPMP
  • 219BLUEPRINT
  • 1744DN
  • 167 T2DKP
  • 151GTEx
  • 111T2D
  • 101eQTLCatalogue
  • 77CMDGA
  • 67HPAP
  • 43STARNET
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 5287tissue
  • 2417primary cell
  • 1709cell line
  • in vitro differentiated cells
  • 4stem cell
Organ
  • 2891vasculature
  • 2832blood vessel
  • 2813bodily fluid
  • 2803blood
  • 2655vein
  • 892epithelium
  • 644kidney
  • 447brain
  • 402connective tissue
  • 371musculature of body
  • 302lung
  • 283intestine
  • 269pancreas
  • 251heart
  • 242limb
  • 180skin of body
  • 172embryo
  • 168large intestine
  • 143liver
  • 138extraembryonic component
  • 119stomach
  • 97eye
  • 96adipose tissue
  • 84small intestine
  • 81bone element
  • 79uterus
  • 73adrenal gland
  • 73artery
  • 73mammary gland
  • 70placenta
  • 70prostate gland
  • 64ureter
  • 53penis
  • 50lymph node
  • 48thymus
  • 47gonad
  • 45esophagus
  • 41spinal cord
  • 33spleen
  • 25nerve
  • 24lymphoid tissue
  • 23ovary
  • 23testis
  • 23thyroid gland
  • 21lymphatic vessel
  • 19mouth
  • 18skeleton
  • 14bronchus
  • 13breast
  • 13pituitary gland
  • 11bone marrow
  • 10tongue
  • 10urinary bladder
  • 10vagina
  • 3trachea
  • 1pericardium
Project
  • 8708AMP
  • 333ENCODE
  • 281KPMP
  • 60T1D
  • 19LungMap
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 5837hg19
  • 1838GRCh38
  • 3hg18
annotation_type!
  • binding sites
biosample_type!
  • in vitro differentiated cells
BIOSAMPLE
TYPE

9419 results

search-icontable-tab-icon
Clear Filters
pQTL
candidate regulatory elements
target gene predictions
chromatin state
histone modifications
accessible chromatin
gene expression
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
tissue
whole blood26351
heart3720211532
stomach4021191311
kidney291416210711
brain29161832121
primary cell
monocyte28618154121
common myeloid progenitor, CD34-positive271413
CD8-positive, alpha-beta T cell7513043
B cell1710862
endothelial cell371159122
cell line
HeLa-S35553
A54921191811
H1-hESC1391118
K562723711
MCF-796521
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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