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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
28
candidate regulatory elements
19
target gene predictions
binding sites
7
accessible chromatin
4
histone modifications
1
chromatin state
1
variant allelic effects
Date released
28
September, 2022
18
February, 2021
6
November, 2021
4
June, 2020
2
May, 2021
1
August, 2017
1
February, 2024
Available data
60
bed bed3+
bed bed9
3
bigWig
Organism
60
Homo sapiens
Biosample type
32
primary cell
26
cell line
2
in vitro differentiated cells
tissue
Organ
479
epithelium
263
connective tissue
143
bodily fluid
139
embryo
136
blood
132
skin of body
99
pancreas
99
vasculature
95
lung
91
kidney
90
brain
65
uterus
64
blood vessel
60
mammary gland
59
liver
57
musculature of body
48
bone element
48
intestine
46
penis
46
prostate gland
42
lymph node
36
extraembryonic component
32
heart
31
large intestine
30
eye
19
artery
15
vein
12
bronchus
12
lymphatic vessel
11
adrenal gland
11
stomach
10
bone marrow
10
pituitary gland
9
esophagus
9
placenta
8
gonad
6
limb
6
mouth
5
lymphoid tissue
5
testis
4
adipose tissue
4
small intestine
4
spinal cord
3
nose
3
thyroid gland
3
trachea
2
ovary
1
pericardium
1
thymus
Project
54
AMP
6
ENCODE
Genome assembly (visualization)
60
hg19
6
GRCh38
annotation_type!
binding sites
biosample_type!
tissue
files.file_type!
bed bed9
tsv
BIOSAMPLE
TYPE
60 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
histone modifications
chromatin state
variant allelic effects
primary cell
mammary gland epithelial cell
3
4
1
1
luminal epithelial cell of mammary gland
1
3
2
mammary epithelial cell
3
1
1
1
myoepithelial cell of mammary gland
4
2
fibroblast of mammary gland
2
1
1
1
cell line
MCF-7
9
6
1
2
T47D
3
2
MCF 10A
3
in vitro differentiated cells
mammary gland epithelial cell
1
1
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