Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • binding sites
  • 584histone modifications
  • 399target gene predictions
  • 327candidate regulatory elements
  • 191chromatin state
  • 163accessible chromatin
  • 21gene expression
  • 10differential activity
  • 10eQTL
  • 4variant allelic effects
Date released
  • 730February, 2021
  • 542September, 2022
  • 168February, 2024
  • 152June, 2020
  • 63May, 2021
  • 10January, 2022
  • 9March, 2023
  • 8August, 2021
  • 7March, 2020
  • 7May, 2022
  • 5August, 2017
  • 2May, 2020
  • 2October, 2022
  • 1February, 2023
  • 1January, 2020
  • 1March, 2024
  • 1November, 2019
Available data
  • 1492bed bed3+
  • 179bed bed9
  • 22tsv
  • 7bed bed9+
  • 4bigWig
Organism
  • 1709Homo sapiens
Collection Tags
  • 732ChIP-Atlas
  • 537EpiMap
  • 1684DN
  • 148ENCODE
  • 60DGA
  • 25T1D
  • 18 T2DKP
  • 12AMP
  • 12CMDGA
  • 10T2D
  • 10eQTLCatalogue
  • 7BLUEPRINT
  • 1GTEx
  • 1T2DKP
Biosample type
  • 5287tissue
  • 2417primary cell
  • 1709cell line
  • 432in vitro differentiated cells
  • 4stem cell
Organ
  • 161bodily fluid
  • 152blood
  • 117embryo
  • 90lung
  • 68brain
  • 64uterus
  • 63skin of body
  • 50lymph node
  • 47bone element
  • 47prostate gland
  • 39kidney
  • 35epithelium
  • 33mammary gland
  • 33pancreas
  • 29intestine
  • 29large intestine
  • 25connective tissue
  • 23liver
  • 16musculature of body
  • 15penis
  • 10pituitary gland
  • 7eye
  • 7heart
  • 7vasculature
  • 6limb
  • 6lymphoid tissue
  • 5gonad
  • 5testis
  • 4blood vessel
  • 4mouth
  • 3artery
  • 3extraembryonic component
  • 3placenta
  • 2adipose tissue
  • 1lymphatic vessel
  • 1spinal cord
  • 1vein
Project
  • 1700AMP
  • 9community
Genome assembly (visualization)
  • 1668hg19
  • 365GRCh38
annotation_type!
  • binding sites
BIOSAMPLE
TYPE

1709 results

search-icontable-tab-icon
Clear Filters
histone modifications
target gene predictions
candidate regulatory elements
chromatin state
accessible chromatin
gene expression
differential activity
eQTL
variant allelic effects
cell line
HeLa-S35553
A54911921181
H1-hESC1391118
K562123771
MCF-726951
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego