Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
919
candidate regulatory elements
505
target gene predictions
495
chromatin state
189
accessible chromatin
109
eQTL
105
gene expression
88
histone modifications
65
Fine-mapped variants
42
variant allelic effects
binding sites
4
differential activity
3
pQTL
3
variant to gene
2
sQTL
1
caQTL
1
other
Date released
1347
September, 2022
596
February, 2021
92
March, 2020
62
June, 2020
55
January, 2020
53
January, 2022
53
May, 2020
45
August, 2021
45
February, 2020
30
May, 2021
27
March, 2024
25
February, 2024
24
February, 2023
19
August, 2017
17
November, 2022
8
April, 2019
8
May, 2019
7
November, 2019
6
March, 2023
3
October, 2019
3
September, 2018
2
January, 2018
2
May, 2022
1
August, 2020
August, 2022
Available data
1766
bed bed3+
470
bed bed9
194
tsv
112
bigWig
25
bigBed bed9
1
bam
Organism
2529
Homo sapiens
Biosample type
2531
tissue
2310
primary cell
1705
cell line
432
in vitro differentiated cells
4
stem cell
Organ
344
brain
305
musculature of body
297
kidney
235
limb
231
intestine
213
heart
180
lung
133
large intestine
111
pancreas
108
stomach
97
extraembryonic component
94
connective tissue
blood vessel
84
vasculature
83
adipose tissue
80
small intestine
69
eye
64
ureter
62
adrenal gland
59
epithelium
59
placenta
57
liver
47
thymus
42
artery
38
gonad
36
spinal cord
35
esophagus
33
embryo
33
spleen
25
nerve
23
skin of body
22
bone element
21
ovary
20
thyroid gland
18
lymphoid tissue
18
skeleton
17
testis
13
breast
13
prostate gland
11
mouth
11
uterus
10
tongue
10
urinary bladder
10
vagina
4
bodily fluid
3
blood
3
pituitary gland
1
mammary gland
1
penis
1
vein
Project
2526
AMP
5
ITG
Genome assembly (visualization)
2347
hg19
695
GRCh38
3
hg18
annotation_type!
binding sites
month_released!
August, 2022
organ_slims!
blood vessel
BIOSAMPLE
TYPE
2531 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
eQTL
gene expression
histone modifications
Fine-mapped variants
variant allelic effects
differential activity
pQTL
variant to gene
sQTL
caQTL
other
tissue
heart
37
20
21
5
3
1
2
stomach
40
21
19
3
1
1
1
kidney
29
14
16
10
1
7
2
1
brain
29
16
18
2
2
1
3
1
lung
33
17
16
1
1
+ See 246 more…
See all biosamples
Download