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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 1709candidate regulatory elements
  • 1357target gene predictions
  • 977histone modifications
  • 913accessible chromatin
  • 904chromatin state
  • binding sites
  • 689gene expression
  • 189eQTL
  • 172differential activity
  • 141variant allelic effects
  • 84Fine-mapped variants
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 2511September, 2022
  • 1872February, 2021
  • 384May, 2021
  • 372February, 2024
  • 333November, 2021
  • 289June, 2020
  • 286September, 2023
  • 152May, 2020
  • 127August, 2021
  • 127March, 2020
  • 106January, 2022
  • 83January, 2020
  • 70March, 2023
  • 64February, 2020
  • 56January, 2021
  • 49May, 2022
  • 44November, 2022
  • 40May, 2024
  • 38March, 2025
  • 32February, 2023
  • 31August, 2017
  • 30March, 2024
  • 19April, 2020
  • 13November, 2019
  • 10October, 2022
  • 9August, 2018
  • 9October, 2019
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 2January, 2025
  • 1April, 2019
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 5267bed bed3+
  • 3576tsv
  • 869bed bed9
  • 546bigWig
  • 108txt
  • bigBed bed9
  • 34bed bed9+
  • 26csv
  • 16bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 9763Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2499EpiMap
  • 1130ChIP-Atlas
  • 875ENCODE
  • 634DGA
  • 532AMP
  • 421T1D
  • 405T2DKP
  • 281KPMP
  • 219BLUEPRINT
  • 174 T2DKP
  • 1744DN
  • 151GTEx
  • 111T2D
  • 101eQTLCatalogue
  • 100CMDGA
  • 67HPAP
  • 43STARNET
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 5256tissue
  • 2413primary cell
  • 1709cell line
  • 427in vitro differentiated cells
  • 4stem cell
Organ
  • 2884vasculature
  • 2824blood vessel
  • 2813bodily fluid
  • 2803blood
  • 2653vein
  • 913epithelium
  • 643kidney
  • 447connective tissue
  • 445brain
  • 370musculature of body
  • 302lung
  • 283intestine
  • 270pancreas
  • 242heart
  • 238limb
  • 202embryo
  • 186skin of body
  • 168large intestine
  • 149liver
  • 143extraembryonic component
  • 119stomach
  • 103eye
  • 96adipose tissue
  • 84small intestine
  • 81bone element
  • 79uterus
  • 75mammary gland
  • 73adrenal gland
  • 71artery
  • 70placenta
  • 70prostate gland
  • 64ureter
  • 57penis
  • 50lymph node
  • 48thymus
  • 47gonad
  • 45esophagus
  • 41spinal cord
  • 33spleen
  • 24lymphoid tissue
  • 24nerve
  • 23ovary
  • 23testis
  • 23thyroid gland
  • 22lymphatic vessel
  • 19mouth
  • 18skeleton
  • 14bronchus
  • 13breast
  • 13pituitary gland
  • 11bone marrow
  • 10tongue
  • 10urinary bladder
  • 10vagina
  • 4nose
  • 3trachea
  • 1pericardium
Project
  • 9100AMP
  • 333ENCODE
  • 281KPMP
  • 60T1D
  • 19LungMap
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 6146hg19
  • 1872GRCh38
  • 3hg18
annotation_type!
  • binding sites
files.file_type!
  • bigBed bed9
BIOSAMPLE
TYPE

9811 results

search-icontable-tab-icon
Clear Filters
pQTL
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
chromatin state
gene expression
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart3720151932
stomach4021131911
kidney291421014711
brain29163216121
primary cell
monocyte28618154121
common myeloid progenitor, CD34-positive271413
CD8-positive, alpha-beta T cell7530413
B cell1710682
endothelial cell371159122
cell line
HeLa-S35553
A54921191118
H1-hESC1391118
K562723117
MCF-796215
in vitro differentiated cells
neural progenitor cell55151047
hematopoietic multipotent progenitor cell191011101
adipocyte461461
cardiomyocytes11
mesenchymal stem cell33112
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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