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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
candidate regulatory elements
44
target gene predictions
36
chromatin state
10
accessible chromatin
binding sites
5
histone modifications
2
eQTL
Date released
98
September, 2022
41
February, 2021
7
June, 2020
6
November, 2021
5
May, 2021
3
August, 2017
3
February, 2024
2
January, 2022
1
March, 2020
Available data
131
bed bed3+
33
bed bed9
3
bigWig
tsv
Organism
166
Homo sapiens
Biosample type
131
tissue
29
cell line
6
primary cell
Organ
578
epithelium
394
kidney
383
brain
371
connective tissue
354
musculature of body
301
lung
280
intestine
225
limb
223
heart
192
embryo
184
skin of body
184
vasculature
182
pancreas
171
bodily fluid
166
large intestine
161
blood
143
extraembryonic component
141
blood vessel
117
liver
117
stomach
101
eye
84
small intestine
77
bone element
77
uterus
75
mammary gland
72
adrenal gland
70
placenta
69
prostate gland
65
adipose tissue
64
ureter
57
penis
53
artery
50
lymph node
48
thymus
45
gonad
43
esophagus
36
spinal cord
32
spleen
23
lymphoid tissue
22
ovary
22
testis
22
thyroid gland
19
nerve
19
vein
18
mouth
18
skeleton
17
lymphatic vessel
14
bronchus
12
breast
12
pituitary gland
11
bone marrow
9
tongue
9
urinary bladder
9
vagina
4
nose
3
trachea
1
pericardium
Project
160
AMP
6
ENCODE
Genome assembly (visualization)
164
hg19
43
GRCh38
annotation_type!
binding sites
files.file_type!
bigBed narrowPeak
tsv
BIOSAMPLE
TYPE
166 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
eQTL
tissue
large intestine
27
14
13
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
1
colonic mucosa
4
2
3
1
mucosa of rectum
4
2
3
+ See 4 more…
cell line
HT-29
2
2
1
1
1
HCT116
2
3
1
SW480
2
1
1
1
1
RKO
1
1
1
colon epithelial cell
1
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
3
See all biosamples
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