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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 1709candidate regulatory elements
  • 1354target gene predictions
  • 977histone modifications
  • 942chromatin state
  • binding sites
  • 680gene expression
  • 385accessible chromatin
  • 189eQTL
  • 172differential activity
  • 137variant allelic effects
  • 84Fine-mapped variants
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 2507September, 2022
  • 1858February, 2021
  • 376May, 2021
  • 334February, 2024
  • 289June, 2020
  • 286September, 2023
  • 127March, 2020
  • 111November, 2021
  • 107August, 2021
  • 102January, 2022
  • 102May, 2020
  • 70March, 2023
  • 64February, 2020
  • 42May, 2022
  • 40May, 2024
  • 38March, 2025
  • 35August, 2017
  • 33November, 2022
  • 30March, 2024
  • 28January, 2021
  • 24January, 2020
  • 13February, 2023
  • 10October, 2022
  • 9August, 2018
  • 8April, 2019
  • 7May, 2019
  • 5October, 2019
  • 2January, 2018
  • 2January, 2025
  • 2November, 2019
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1November, 2020
Available data
  • 5267bed bed3+
  • 3576tsv
  • 869bed bed9
  • bigWig
  • 108txt
  • 40bigBed bed9
  • 34bed bed9+
  • 26csv
  • 16bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 9301Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2499EpiMap
  • 1130ChIP-Atlas
  • 875ENCODE
  • 579DGA
  • 380T1D
  • 295AMP
  • 281KPMP
  • 206BLUEPRINT
  • 1744DN
  • 152 T2DKP
  • 151GTEx
  • 147T2DKP
  • 104T2D
  • 101eQTLCatalogue
  • 69CMDGA
  • 55HPAP
  • 43STARNET
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 5167tissue
  • 2007primary cell
  • 1705cell line
  • 420in vitro differentiated cells
  • 4stem cell
Organ
  • 2861vasculature
  • 2813bodily fluid
  • 2809blood vessel
  • 2803blood
  • 2654vein
  • 739epithelium
  • 609kidney
  • 430brain
  • 394connective tissue
  • 357musculature of body
  • 293lung
  • 272intestine
  • 230heart
  • 228limb
  • 215pancreas
  • 200embryo
  • 181skin of body
  • 165large intestine
  • 140extraembryonic component
  • 127liver
  • 114stomach
  • 92adipose tissue
  • 82small intestine
  • 78uterus
  • 72mammary gland
  • 71bone element
  • 70prostate gland
  • 68placenta
  • 67adrenal gland
  • 67eye
  • 64artery
  • 61ureter
  • 57penis
  • 50lymph node
  • 47thymus
  • 46gonad
  • 43esophagus
  • 41spinal cord
  • 32spleen
  • 24lymphoid tissue
  • 23nerve
  • 23testis
  • 22ovary
  • 22thyroid gland
  • 19lymphatic vessel
  • 19mouth
  • 13breast
  • 13pituitary gland
  • 12bronchus
  • 10skeleton
  • 10tongue
  • 10urinary bladder
  • 10vagina
  • 9bone marrow
  • 4nose
  • 3trachea
  • 1pericardium
Project
  • 8863AMP
  • 281KPMP
  • 111ENCODE
  • 32T1D
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 5649hg19
  • 1521GRCh38
  • 3hg18
annotation_type!
  • binding sites
files.file_type!
  • bigWig
BIOSAMPLE
TYPE

9305 results

search-icontable-tab-icon
Clear Filters
pQTL
candidate regulatory elements
target gene predictions
histone modifications
chromatin state
gene expression
accessible chromatin
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart3720121322
stomach4021119131
brain29163181121
kidney29142157111
primary cell
monocyte2861524121
common myeloid progenitor, CD34-positive271413
CD8-positive, alpha-beta T cell753013
B cell171082
CD4-positive, alpha-beta memory T cell1499
cell line
HeLa-S35553
A54921191181
H1-hESC1391181
K562723171
MCF-796251
in vitro differentiated cells
neural progenitor cell55154710
hematopoietic multipotent progenitor cell191011011
adipocyte461613
embryonic stem cell1156
cardiomyocytes11
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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