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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
candidate regulatory elements
39
target gene predictions
36
chromatin state
10
accessible chromatin
binding sites
5
histone modifications
2
eQTL
Date released
98
September, 2022
41
February, 2021
7
June, 2020
6
November, 2021
May, 2021
3
August, 2017
3
February, 2024
2
January, 2022
1
March, 2020
Available data
126
bed bed3+
33
bed bed9
3
bigWig
tsv
Organism
161
Homo sapiens
Biosample type
128
tissue
27
cell line
6
primary cell
Organ
565
epithelium
394
kidney
372
brain
351
connective tissue
348
musculature of body
297
lung
274
intestine
222
limb
218
heart
187
embryo
179
pancreas
179
skin of body
178
vasculature
167
bodily fluid
161
large intestine
157
blood
140
extraembryonic component
138
blood vessel
115
stomach
112
liver
101
eye
83
small intestine
77
bone element
75
uterus
73
mammary gland
70
adrenal gland
69
placenta
67
prostate gland
64
ureter
62
adipose tissue
56
penis
51
artery
49
lymph node
47
thymus
44
gonad
43
esophagus
35
spinal cord
31
spleen
23
lymphoid tissue
22
testis
21
ovary
21
thyroid gland
19
nerve
18
mouth
18
skeleton
18
vein
14
bronchus
14
lymphatic vessel
11
bone marrow
11
breast
9
tongue
9
urinary bladder
9
vagina
4
nose
3
trachea
2
pituitary gland
pericardium
Project
155
AMP
6
ENCODE
Genome assembly (visualization)
159
hg19
43
GRCh38
annotation_type!
binding sites
files.file_type!
tsv
month_released!
May, 2021
organ_slims!
pericardium
BIOSAMPLE
TYPE
161 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
eQTL
tissue
large intestine
27
13
13
1
1
sigmoid colon
10
6
5
1
transverse colon
8
4
4
1
1
colonic mucosa
4
2
3
1
mucosa of rectum
4
2
3
+ See 4 more…
cell line
HCT116
2
3
1
HT-29
2
1
1
1
1
SW480
2
1
1
1
1
RKO
1
1
1
colon epithelial cell
1
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
3
See all biosamples
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