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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
142
candidate regulatory elements
82
target gene predictions
75
chromatin state
12
accessible chromatin
11
histone modifications
binding sites
4
eQTL
3
gene expression
3
variant allelic effects
Date released
212
September, 2022
82
February, 2021
November, 2021
12
June, 2020
7
May, 2021
6
February, 2024
4
August, 2017
4
January, 2022
3
March, 2024
2
March, 2020
Available data
254
bed bed3+
71
bed bed9
3
tsv
Organism
332
Homo sapiens
Biosample type
290
tissue
32
cell line
10
primary cell
Organ
779
epithelium
642
kidney
450
brain
378
connective tissue
357
musculature of body
293
lung
264
intestine
253
pancreas
242
limb
240
heart
239
vasculature
200
embryo
185
blood vessel
176
skin of body
172
bodily fluid
162
blood
162
large intestine
140
extraembryonic component
138
liver
110
stomach
99
eye
86
adipose tissue
80
bone element
80
small intestine
77
uterus
70
prostate gland
69
artery
69
mammary gland
68
placenta
64
ureter
63
adrenal gland
57
penis
50
lymph node
47
thymus
45
gonad
41
esophagus
41
spinal cord
33
spleen
25
nerve
24
lymphoid tissue
23
testis
21
ovary
21
thyroid gland
20
vein
19
mouth
18
skeleton
16
lymphatic vessel
13
breast
13
pituitary gland
12
bronchus
10
bone marrow
10
tongue
10
urinary bladder
10
vagina
4
nose
3
trachea
1
pericardium
Project
332
AMP
Genome assembly (visualization)
325
hg19
77
GRCh38
annotation_type!
binding sites
month_released!
January, 2018
November, 2021
BIOSAMPLE
TYPE
332 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
histone modifications
eQTL
gene expression
variant allelic effects
tissue
small intestine
29
17
15
1
1
placenta
26
15
14
1
2
1
large intestine
27
14
13
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
1
+ See 15 more…
cell line
HT-29
2
2
1
1
1
HCT116
2
3
1
SW480
2
1
1
1
1
HTR-8/Svneo
1
1
1
RKO
1
1
1
+ See 4 more…
primary cell
fibroblast of villous mesenchyme
2
1
1
1
1
enterocyte
3
intestinal epithelial cell
1
See all biosamples
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