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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 1709candidate regulatory elements
  • 1357target gene predictions
  • 977histone modifications
  • 944chromatin state
  • binding sites
  • 689gene expression
  • 624accessible chromatin
  • 189eQTL
  • 172differential activity
  • 141variant allelic effects
  • 84Fine-mapped variants
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 2511September, 2022
  • 1872February, 2021
  • 389May, 2021
  • 372February, 2024
  • 333November, 2021
  • June, 2020
  • 286September, 2023
  • 155May, 2020
  • 127August, 2021
  • 127March, 2020
  • 106January, 2022
  • 89January, 2020
  • 70March, 2023
  • 64February, 2020
  • 56January, 2021
  • 49May, 2022
  • 44November, 2022
  • 40May, 2024
  • 38March, 2025
  • 35August, 2017
  • 32February, 2023
  • 30March, 2024
  • 19April, 2020
  • 14November, 2019
  • 14October, 2019
  • 10October, 2022
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 2January, 2025
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 4979bed bed3+
  • 3576tsv
  • 869bed bed9
  • 546bigWig
  • 108txt
  • 40bigBed bed9
  • 34bed bed9+
  • 26csv
  • 16bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 9514Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2499EpiMap
  • 875ENCODE
  • 841ChIP-Atlas
  • 639DGA
  • 533AMP
  • 421T1D
  • 406T2DKP
  • 281KPMP
  • 219BLUEPRINT
  • 174 T2DKP
  • 1744DN
  • 151GTEx
  • 111T2D
  • 101eQTLCatalogue
  • 100CMDGA
  • 67HPAP
  • 43STARNET
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 5224tissue
  • 2364primary cell
  • 1557cell line
  • 411in vitro differentiated cells
  • 4stem cell
Organ
  • 2886vasculature
  • 2828blood vessel
  • 2801bodily fluid
  • 2791blood
  • 2654vein
  • 890epithelium
  • 630kidney
  • 430brain
  • 429connective tissue
  • 367musculature of body
  • 296lung
  • 273intestine
  • 268pancreas
  • 247heart
  • 236limb
  • 192embryo
  • 178skin of body
  • 161large intestine
  • 145liver
  • 137extraembryonic component
  • 116stomach
  • 97eye
  • 96adipose tissue
  • 83small intestine
  • 77uterus
  • 76bone element
  • 72adrenal gland
  • 71mammary gland
  • 70artery
  • 68placenta
  • 65prostate gland
  • 63ureter
  • 54penis
  • 47thymus
  • 43esophagus
  • 43gonad
  • 42lymph node
  • 39spinal cord
  • 32spleen
  • 24nerve
  • 22lymphoid tissue
  • 22ovary
  • 22thyroid gland
  • 21lymphatic vessel
  • 21testis
  • 18mouth
  • 18skeleton
  • 13bronchus
  • 13pituitary gland
  • 12breast
  • 11bone marrow
  • 10vagina
  • 9tongue
  • 9urinary bladder
  • 3nose
  • 2trachea
  • 1pericardium
Project
  • 8851AMP
  • 333ENCODE
  • 281KPMP
  • 60T1D
  • 19LungMap
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 5898hg19
  • 1903GRCh38
  • 3hg18
annotation_type!
  • binding sites
month_released!
  • June, 2020
BIOSAMPLE
TYPE

9562 results

search-icontable-tab-icon
Clear Filters
pQTL
candidate regulatory elements
target gene predictions
histone modifications
chromatin state
gene expression
accessible chromatin
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart3720121332
stomach402111911
kidney29142167911
brain29163181121
primary cell
monocyte28615164121
common myeloid progenitor, CD34-positive271413
CD8-positive, alpha-beta T cell7530134
B cell1710826
endothelial cell371915122
cell line
HeLa-S35553
A5492119118
H1-hESC139118
K56272317
EndoC_BH1118831
in vitro differentiated cells
neural progenitor cell55154710
hematopoietic multipotent progenitor cell19101101
adipocyte461613
embryonic stem cell1156
cardiomyocytes11
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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