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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 1709candidate regulatory elements
  • 1339target gene predictions
  • 977histone modifications
  • 941chromatin state
  • 859accessible chromatin
  • binding sites
  • 689gene expression
  • 189eQTL
  • 172differential activity
  • 84Fine-mapped variants
  • 62variant allelic effects
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 2other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 2511September, 2022
  • 1872February, 2021
  • 389May, 2021
  • 372February, 2024
  • 333November, 2021
  • 289June, 2020
  • 286September, 2023
  • May, 2020
  • 127August, 2021
  • 127March, 2020
  • 106January, 2022
  • 89January, 2020
  • 70March, 2023
  • 64February, 2020
  • 56January, 2021
  • 49May, 2022
  • 44November, 2022
  • 40May, 2024
  • 38March, 2025
  • 35August, 2017
  • 32February, 2023
  • 30March, 2024
  • 19April, 2020
  • 14November, 2019
  • 14October, 2019
  • 10October, 2022
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 2January, 2025
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 5132bed bed3+
  • 3576tsv
  • 866bed bed9
  • 493bigWig
  • 108txt
  • 37bigBed bed9
  • 34bed bed9+
  • 26csv
  • 16bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 9694Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2499EpiMap
  • 1130ChIP-Atlas
  • 873ENCODE
  • 552DGA
  • 532AMP
  • 406T2DKP
  • 404T1D
  • 281KPMP
  • 202BLUEPRINT
  • 1744DN
  • 171 T2DKP
  • 151GTEx
  • 111T2D
  • 101eQTLCatalogue
  • 100CMDGA
  • 67HPAP
  • 43STARNET
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 5227tissue
  • 2331primary cell
  • 1707cell line
  • 425in vitro differentiated cells
  • 4stem cell
Organ
  • 2877vasculature
  • 2821blood vessel
  • 2813bodily fluid
  • 2803blood
  • 2653vein
  • 900epithelium
  • 626kidney
  • 439connective tissue
  • 432brain
  • 368musculature of body
  • 302lung
  • 283intestine
  • 266pancreas
  • 241heart
  • 232limb
  • 202embryo
  • 186skin of body
  • 168large intestine
  • 147liver
  • 143extraembryonic component
  • 119stomach
  • 101eye
  • 94adipose tissue
  • 84small intestine
  • 80bone element
  • 79uterus
  • 75mammary gland
  • 73adrenal gland
  • 70placenta
  • 70prostate gland
  • 68artery
  • 61ureter
  • 57penis
  • 50lymph node
  • 47gonad
  • 47thymus
  • 45esophagus
  • 41spinal cord
  • 33spleen
  • 24lymphoid tissue
  • 23ovary
  • 23testis
  • 23thyroid gland
  • 22lymphatic vessel
  • 22nerve
  • 19mouth
  • 18skeleton
  • 14bronchus
  • 13breast
  • 13pituitary gland
  • 10bone marrow
  • 10tongue
  • 10urinary bladder
  • 10vagina
  • 4nose
  • 3trachea
  • 1pericardium
Project
  • 8985AMP
  • 333ENCODE
  • 281KPMP
  • 60T1D
  • 19LungMap
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 6048hg19
  • 1892GRCh38
  • 3hg18
annotation_type!
  • binding sites
month_released!
  • May, 2020
BIOSAMPLE
TYPE

9696 results

search-icontable-tab-icon
Clear Filters
pQTL
candidate regulatory elements
target gene predictions
histone modifications
chromatin state
accessible chromatin
gene expression
eQTL
differential activity
Fine-mapped variants
variant allelic effects
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart372012053
stomach4021119311
kidney29142161071
brain2916318212
primary cell
monocyte18616154121
common myeloid progenitor, CD34-positive271413
CD8-positive, alpha-beta T cell7430123
B cell179842
endothelial cell371159122
cell line
HeLa-S35553
A54921191181
H1-hESC1391118
K562723171
MCF-796251
in vitro differentiated cells
neural progenitor cell55154107
hematopoietic multipotent progenitor cell191011011
adipocyte461641
embryonic stem cell1156
cardiomyocytes11
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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