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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
37
candidate regulatory elements
11
target gene predictions
10
accessible chromatin
binding sites
5
histone modifications
3
chromatin state
2
eQTL
2
gene expression
Date released
September, 2022
41
February, 2021
7
June, 2020
6
November, 2021
5
May, 2021
3
August, 2017
3
February, 2024
2
January, 2022
2
March, 2024
1
March, 2020
Available data
66
bed bed3+
3
bigWig
2
tsv
Organism
70
Homo sapiens
Biosample type
47
tissue
17
cell line
6
primary cell
Organ
765
epithelium
420
kidney
317
connective tissue
270
brain
228
pancreas
173
vasculature
164
musculature of body
144
heart
128
blood vessel
121
embryo
119
intestine
104
limb
99
liver
97
bodily fluid
93
blood
92
lung
84
skin of body
76
eye
70
large intestine
67
uterus
63
adipose tissue
50
stomach
48
artery
44
extraembryonic component
bone element
33
mammary gland
31
adrenal gland
31
prostate gland
27
penis
27
small intestine
26
lymph node
25
ureter
24
esophagus
23
gonad
22
placenta
17
spinal cord
16
lymphatic vessel
16
nerve
15
spleen
15
thymus
14
vein
13
pituitary gland
11
ovary
11
testis
11
thyroid gland
9
lymphoid tissue
9
skeleton
8
bone marrow
8
bronchus
7
breast
7
mouth
4
tongue
4
urinary bladder
4
vagina
3
trachea
1
nose
1
pericardium
Project
64
AMP
6
ENCODE
Genome assembly (visualization)
66
hg19
10
GRCh38
annotation_type!
binding sites
month_released!
September, 2022
organ_slims!
bone element
BIOSAMPLE
TYPE
70 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
histone modifications
chromatin state
eQTL
gene expression
tissue
large intestine
15
1
1
1
sigmoid colon
5
2
1
transverse colon
4
1
1
1
colonic mucosa
2
1
1
mucosa of rectum
2
1
+ See 6 more…
cell line
HT-29
1
1
1
1
HCT116
1
2
RKO
1
1
1
SW480
1
1
1
HCT-116 cell
1
1
+ See 2 more…
primary cell
colon epithelial cell
3
3
See all biosamples
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