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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2640pQTL
  • 971histone modifications
  • 907accessible chromatin
  • 877candidate regulatory elements
  • binding sites
  • 689gene expression
  • 523target gene predictions
  • 189eQTL
  • 172differential activity
  • 141variant allelic effects
  • 111chromatin state
  • 84Fine-mapped variants
  • 13caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • September, 2022
  • 1872February, 2021
  • 389May, 2021
  • 372February, 2024
  • 333November, 2021
  • 289June, 2020
  • 286September, 2023
  • 155May, 2020
  • 127August, 2021
  • 127March, 2020
  • 106January, 2022
  • 89January, 2020
  • 70March, 2023
  • 64February, 2020
  • 56January, 2021
  • 49May, 2022
  • 44November, 2022
  • 40May, 2024
  • 38March, 2025
  • 35August, 2017
  • 32February, 2023
  • 30March, 2024
  • 19April, 2020
  • 14November, 2019
  • 14October, 2019
  • 10October, 2022
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 2January, 2025
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 3589bed bed3+
  • 3576tsv
  • 542bigWig
  • 108txt
  • 40bigBed bed9
  • 36bed bed9
  • 34bed bed9+
  • 26csv
  • 15bigBed narrowPeak
  • 1bam
Organism
  • 7292Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 1129ChIP-Atlas
  • 875ENCODE
  • 638DGA
  • 526AMP
  • 421T1D
  • 406T2DKP
  • 281KPMP
  • 219BLUEPRINT
  • 1744DN
  • 173 T2DKP
  • 151GTEx
  • 108T2D
  • 101eQTLCatalogue
  • 100CMDGA
  • 67HPAP
  • 43STARNET
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
  • 1EpiMap
Biosample type
  • 3910tissue
  • 1930primary cell
  • 1167cell line
  • 327in vitro differentiated cells
  • 4stem cell
Organ
  • 2817vasculature
  • 2772blood vessel
  • 2738bodily fluid
  • 2734blood
  • 2649vein
  • 764epithelium
  • 420kidney
  • 329connective tissue
  • 271brain
  • 228pancreas
  • 169musculature of body
  • 144heart
  • 121embryo
  • 119intestine
  • 104limb
  • 104liver
  • 92lung
  • 84skin of body
  • 76eye
  • 73adipose tissue
  • 70large intestine
  • 67uterus
  • 52artery
  • 50stomach
  • 44extraembryonic component
  • 39bone element
  • 33mammary gland
  • 31adrenal gland
  • 31prostate gland
  • 27penis
  • 27small intestine
  • 26lymph node
  • 25ureter
  • 24esophagus
  • 23gonad
  • 22placenta
  • 17spinal cord
  • 16lymphatic vessel
  • 16nerve
  • 15spleen
  • 15thymus
  • 13pituitary gland
  • 11ovary
  • 11testis
  • 11thyroid gland
  • 9lymphoid tissue
  • 9skeleton
  • 8bone marrow
  • 8bronchus
  • 7breast
  • 7mouth
  • 4tongue
  • 4urinary bladder
  • 4vagina
  • 3trachea
  • 1nose
  • 1pericardium
Project
  • 6629AMP
  • 333ENCODE
  • 281KPMP
  • 60T1D
  • 19LungMap
  • 13community
  • 5ITG
Genome assembly (visualization)
  • 3675hg19
  • 1064GRCh38
  • 3hg18
annotation_type!
  • binding sites
month_released!
  • September, 2022
BIOSAMPLE
TYPE

7340 results

search-icontable-tab-icon
Clear Filters
pQTL
histone modifications
accessible chromatin
candidate regulatory elements
gene expression
target gene predictions
eQTL
differential activity
variant allelic effects
chromatin state
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
islet of Langerhans151111313222
kidney210157112
heart15183122
liver2462392211
primary cell
monocyte86181524121
CD8-positive, alpha-beta T cell3047351
endothelial cell115397122
macrophage123239311
fibroblast163426
cell line
HeLa-S3252
H1-hESC11838
EndoC_BH1188131
K562111171
HFFc619
in vitro differentiated cells
neural progenitor cell1510171
adipocyte142144
embryonic stem cell1615
hematopoietic multipotent progenitor cell1191
cardiomyocytes11
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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