Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 19candidate regulatory elements
  • 13eQTL
  • 13gene expression
  • 13target gene predictions
  • 10chromatin state
  • 7accessible chromatin
  • 6Fine-mapped variants
  • 3variant allelic effects
  • binding sites
  • 1histone modifications
Date released
  • 24September, 2022
  • 21February, 2021
  • 8March, 2020
  • 6August, 2021
  • 5February, 2020
  • 4January, 2020
  • 3January, 2022
  • 3May, 2020
  • 3May, 2021
  • 2August, 2017
  • 2September, 2018
  • 1January, 2018
  • 1June, 2020
  • 1November, 2022
Available data
  • 53bed bed3+
  • 20tsv
  • 8bed bed9
  • 5bigWig
  • 1bigBed bed9
Organism
  • 85Homo sapiens
Collection Tags
  • 24 T2DKP
  • 24EpiMap
  • 18DGA
  • 14ENCODE
  • 10GTEx
  • 9T2DKP
  • 7AMP
  • 3T1D
  • 3T2D
  • 3eQTLCatalogue
  • 2ChIP-Atlas
  • 1CMDGA
Biosample type
  • 81tissue
  • 2cell line
  • 1in vitro differentiated cells
  • 1primary cell
Organ
  • 2884vasculature
  • 2824blood vessel
  • 2807bodily fluid
  • 2797blood
  • 2655vein
  • 918epithelium
  • 645kidney
  • 451brain
  • 439connective tissue
  • 379musculature of body
  • 302lung
  • 283intestine
  • 272pancreas
  • 254heart
  • 242limb
  • 202embryo
  • 186skin of body
  • 168large intestine
  • 144liver
  • 143extraembryonic component
  • 119stomach
  • 103eye
  • 85adipose tissue
  • 84small intestine
  • 81bone element
  • 79uterus
  • 75mammary gland
  • 73adrenal gland
  • 70placenta
  • 70prostate gland
  • 69artery
  • 64ureter
  • 57penis
  • 50lymph node
  • 48thymus
  • 47gonad
  • 45esophagus
  • 41spinal cord
  • 33spleen
  • 25nerve
  • 24lymphoid tissue
  • 23ovary
  • 23testis
  • 23thyroid gland
  • 22lymphatic vessel
  • 19mouth
  • 18skeleton
  • 14bronchus
  • 13breast
  • 13pituitary gland
  • 11bone marrow
  • 10tongue
  • 10urinary bladder
  • 10vagina
  • 4nose
  • 3trachea
  • 1pericardium
Project
  • 85AMP
Genome assembly (visualization)
  • 67hg19
  • 23GRCh38
  • 2hg18
annotation_type!
  • binding sites
BIOSAMPLE
TYPE

85 results

search-icontable-tab-icon
Clear Filters
candidate regulatory elements
eQTL
gene expression
target gene predictions
chromatin state
accessible chromatin
Fine-mapped variants
variant allelic effects
histone modifications
tissue
adipose tissue7438621
subcutaneous adipose tissue2651231
omental fat pad5222223
subcutaneous abdominal adipose tissue51
visceral abdominal adipose tissue12
cell line
adipose tissue derived mesenchymal stem cell1
adipose-derived mesenchymal stem cell1
in vitro differentiated cells
white adipose cell1
primary cell
mesenchymal stem cell of adipose1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego