Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
57
target gene predictions
47
candidate regulatory elements
binding sites
27
chromatin state
25
histone modifications
12
accessible chromatin
2
eQTL
1
gene expression
1
pQTL
Date released
75
September, 2022
47
February, 2021
28
February, 2024
12
June, 2020
4
May, 2021
3
August, 2021
2
August, 2017
1
March, 2024
Available data
144
bed bed3+
25
bed bed9
1
tsv
Organism
172
Homo sapiens
Biosample type
161
cell line
7
primary cell
4
tissue
Organ
916
epithelium
645
kidney
450
brain
437
connective tissue
368
musculature of body
302
lung
283
intestine
pancreas
252
heart
248
vasculature
242
limb
202
embryo
188
blood vessel
186
skin of body
172
bodily fluid
168
large intestine
162
blood
145
liver
143
extraembryonic component
119
stomach
103
eye
87
adipose tissue
84
small intestine
81
bone element
79
uterus
75
mammary gland
73
adrenal gland
70
placenta
70
prostate gland
69
artery
64
ureter
57
penis
50
lymph node
48
thymus
47
gonad
45
esophagus
41
spinal cord
33
spleen
25
nerve
24
lymphoid tissue
23
ovary
23
testis
23
thyroid gland
22
lymphatic vessel
20
vein
19
mouth
18
skeleton
14
bronchus
13
breast
13
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
4
nose
3
trachea
pericardium
Project
172
AMP
Genome assembly (visualization)
171
hg19
53
GRCh38
annotation_type!
binding sites
organ_slims!
pancreas
pericardium
BIOSAMPLE
TYPE
172 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
chromatin state
histone modifications
accessible chromatin
eQTL
gene expression
pQTL
cell line
K562
23
7
7
1
1
GM12878
8
2
2
1
1
HAP-1
2
2
1
1
1
NAMALWA cell
2
2
2
1
OCI-LY7
2
2
1
1
1
+ See 26 more…
primary cell
peripheral blood mononuclear cell
4
1
peripheral blood stem cell
1
1
tissue
blood
2
cerebrospinal fluid
1
whole blood
1
See all biosamples
Download