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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
38
accessible chromatin
33
candidate regulatory elements
30
target gene predictions
27
gene expression
24
chromatin state
binding sites
17
histone modifications
8
eQTL
6
differential activity
4
variant allelic effects
3
Fine-mapped variants
1
caQTL
Date released
64
September, 2022
36
February, 2021
23
February, 2024
10
March, 2020
9
August, 2021
9
November, 2021
6
June, 2020
5
September, 2023
4
March, 2023
4
May, 2020
3
August, 2017
3
January, 2020
3
May, 2021
3
May, 2022
2
February, 2020
2
January, 2021
1
April, 2020
1
January, 2022
1
July, 2020
1
November, 2019
1
September, 2018
Available data
124
bed bed3+
36
bigWig
33
tsv
20
bed bed9
3
csv
1
bam
1
bed bed9+
1
bigBed bed9
Organism
191
Homo sapiens
Biosample type
84
primary cell
75
tissue
24
cell line
8
in vitro differentiated cells
Organ
906
epithelium
645
kidney
450
brain
429
connective tissue
368
musculature of body
302
lung
283
intestine
272
pancreas
250
heart
245
vasculature
242
limb
202
embryo
188
blood vessel
186
skin of body
172
bodily fluid
168
large intestine
162
blood
143
extraembryonic component
143
liver
119
stomach
103
eye
87
adipose tissue
84
small intestine
81
bone element
79
uterus
75
mammary gland
73
adrenal gland
70
placenta
70
prostate gland
69
artery
64
ureter
57
penis
50
lymph node
48
thymus
47
gonad
45
esophagus
41
spinal cord
33
spleen
25
nerve
24
lymphoid tissue
23
ovary
23
testis
23
thyroid gland
20
vein
19
lymphatic vessel
19
mouth
18
skeleton
14
bronchus
13
breast
13
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
4
nose
3
trachea
1
pericardium
Project
174
AMP
9
ENCODE
5
KPMP
2
T1D
1
LungMap
Genome assembly (visualization)
155
hg19
72
GRCh38
1
hg18
annotation_type!
binding sites
BIOSAMPLE
TYPE
191 results
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Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
gene expression
chromatin state
histone modifications
eQTL
differential activity
variant allelic effects
Fine-mapped variants
caQTL
primary cell
hepatocyte
8
1
3
13
1
4
2
endothelial cell of hepatic sinusoid
6
4
hepatic stellate cell
3
1
1
1
1
1
1
dermis lymphatic vessel endothelial cell
2
2
2
Lymphatic Endothelial Cell
3
2
+ See 9 more…
tissue
liver
4
13
10
1
9
2
7
1
1
right lobe of liver
2
1
1
1
1
3
femur
2
1
1
arm bone
1
1
1
leg bone
1
1
1
+ See 8 more…
cell line
HepG2
2
2
3
2
5
HuH-7
1
1
1
1
1
HuH-7.5
1
1
1
dermis lymphatic vessel endothelial cell
1
hepatic stellate cell
1
in vitro differentiated cells
hepatocyte
2
1
1
hepatocyte(AFP)
3
dermis microvascular lymphatic vessel endothelial cell
1
See all biosamples
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