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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
253
gene expression
220
accessible chromatin
167
candidate regulatory elements
157
target gene predictions
92
differential activity
85
chromatin state
binding sites
41
variant allelic effects
33
histone modifications
5
eQTL
2
caQTL
Date released
247
September, 2022
194
February, 2021
155
September, 2023
129
November, 2021
70
February, 2024
38
March, 2023
37
May, 2021
31
June, 2020
23
August, 2021
20
January, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
10
May, 2024
9
February, 2020
7
April, 2020
6
August, 2018
6
March, 2020
5
October, 2019
3
August, 2017
2
January, 2022
2
March, 2024
2
May, 2022
1
July, 2020
1
November, 2019
1
October, 2022
Available data
619
bed bed3+
324
tsv
178
bigWig
82
bed bed9
78
txt
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
1055
Homo sapiens
Biosample type
832
primary cell
157
tissue
38
cell line
28
in vitro differentiated cells
Organ
916
epithelium
645
kidney
450
brain
437
connective tissue
368
musculature of body
302
lung
283
intestine
272
pancreas
252
heart
248
vasculature
242
limb
202
embryo
188
blood vessel
186
skin of body
172
bodily fluid
168
large intestine
162
blood
145
liver
143
extraembryonic component
119
stomach
103
eye
87
adipose tissue
84
small intestine
81
bone element
79
uterus
75
mammary gland
73
adrenal gland
70
placenta
70
prostate gland
69
artery
64
ureter
57
penis
50
lymph node
48
thymus
47
gonad
45
esophagus
41
spinal cord
33
spleen
25
nerve
24
lymphoid tissue
23
ovary
23
testis
23
thyroid gland
22
lymphatic vessel
20
vein
19
mouth
18
skeleton
14
bronchus
13
breast
13
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
4
nose
3
trachea
1
pericardium
Project
742
AMP
155
KPMP
129
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
704
hg19
274
GRCh38
annotation_type!
binding sites
BIOSAMPLE
TYPE
1055 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
differential activity
chromatin state
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
15
3
7
2
1
1
2
hepatocyte
13
8
2
3
1
2
4
epithelial cell of proximal tubule
16
1
2
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
foreskin keratinocyte
11
4
4
+ See 153 more…
tissue
placenta
1
26
15
14
2
1
pigmented layer of retina
20
chorionic villus
8
4
4
breast epithelium
1
5
3
2
esophagus squamous epithelium
1
6
2
2
+ See 21 more…
cell line
EndoC_BH1
8
8
1
3
1
HTR-8/Svneo
1
1
1
colon epithelial cell
1
1
1
choroid plexus epithelial cell
1
1
epithelial cell of prostate
1
1
+ See 6 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
trophoblast cell
2
2
1
hepatocyte
2
1
1
hepatocyte(AFP)
3
pancreatic ductal cell
3
+ See 5 more…
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