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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
263
gene expression
232
accessible chromatin
215
target gene predictions
188
candidate regulatory elements
92
differential activity
89
chromatin state
binding sites
43
histone modifications
41
variant allelic effects
3
eQTL
2
caQTL
Date released
256
September, 2022
222
February, 2021
155
September, 2023
129
November, 2021
121
February, 2024
43
June, 2020
42
May, 2021
38
March, 2023
31
August, 2021
20
January, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
10
May, 2024
9
February, 2020
7
April, 2020
7
March, 2020
6
August, 2018
5
October, 2019
4
August, 2017
2
March, 2024
2
May, 2022
1
July, 2020
1
November, 2019
1
October, 2022
Available data
721
bed bed3+
334
tsv
178
bigWig
85
bed bed9
78
txt
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
1168
Homo sapiens
Biosample type
820
primary cell
202
cell line
92
tissue
53
in vitro differentiated cells
1
stem cell
Organ
916
epithelium
645
kidney
450
brain
437
connective tissue
368
musculature of body
302
lung
283
intestine
272
pancreas
252
heart
248
vasculature
242
limb
202
embryo
188
blood vessel
186
skin of body
172
bodily fluid
168
large intestine
162
blood
145
liver
143
extraembryonic component
119
stomach
103
eye
87
adipose tissue
84
small intestine
81
bone element
79
uterus
75
mammary gland
73
adrenal gland
70
placenta
70
prostate gland
69
artery
64
ureter
57
penis
50
lymph node
48
thymus
47
gonad
45
esophagus
41
spinal cord
33
spleen
25
nerve
24
lymphoid tissue
23
ovary
23
testis
23
thyroid gland
22
lymphatic vessel
20
vein
19
mouth
18
skeleton
14
bronchus
13
breast
13
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
4
nose
3
trachea
1
pericardium
Project
855
AMP
155
KPMP
129
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
809
hg19
326
GRCh38
annotation_type!
binding sites
BIOSAMPLE
TYPE
1168 results
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Clear Filters
gene expression
accessible chromatin
target gene predictions
candidate regulatory elements
differential activity
chromatin state
histone modifications
variant allelic effects
eQTL
caQTL
primary cell
endothelial cell
9
15
7
3
1
2
1
2
hepatocyte
13
8
3
2
1
4
2
epithelial cell of proximal tubule
16
1
1
2
1
1
glomerular endothelial cell
14
2
1
2
1
1
foreskin keratinocyte
4
11
4
+ See 150 more…
cell line
H1-hESC
8
1
39
1
1
1
EndoC_BH1
8
8
1
3
1
H9
8
7
1
MM.1S
1
2
2
1
1
GM12864
1
1
2
1
1
+ See 35 more…
tissue
pigmented layer of retina
20
chorionic villus
4
8
4
breast epithelium
1
3
5
2
esophagus squamous epithelium
1
2
6
2
trophoblast
1
3
4
2
+ See 20 more…
in vitro differentiated cells
endodermal cell
2
4
2
mesodermal cell
1
4
1
1
retinal pigment epithelial cell
6
trophoblast cell
2
2
1
ectodermal cell
1
2
1
+ See 12 more…
stem cell
H1-hESC
1
See all biosamples
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