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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
250
gene expression
183
candidate regulatory elements
119
target gene predictions
115
accessible chromatin
94
chromatin state
89
differential activity
27
variant allelic effects
19
eQTL
binding sites
12
histone modifications
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
269
September, 2022
210
February, 2021
140
September, 2023
47
March, 2023
36
August, 2021
33
May, 2021
26
February, 2024
25
May, 2020
21
November, 2021
20
January, 2021
19
June, 2020
18
January, 2020
11
February, 2020
11
March, 2020
7
August, 2018
6
October, 2019
5
January, 2022
3
August, 2017
2
April, 2019
2
March, 2024
2
November, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
May, 2019
Available data
456
bed bed3+
327
tsv
93
bigWig
90
bed bed9
87
txt
14
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
917
Homo sapiens
Biosample type
433
primary cell
408
tissue
72
cell line
4
in vitro differentiated cells
Organ
916
epithelium
645
kidney
450
brain
437
connective tissue
368
musculature of body
302
lung
283
intestine
272
pancreas
252
heart
248
vasculature
242
limb
202
embryo
188
blood vessel
186
skin of body
172
bodily fluid
168
large intestine
162
blood
145
liver
143
extraembryonic component
119
stomach
103
eye
87
adipose tissue
84
small intestine
81
bone element
79
uterus
75
mammary gland
73
adrenal gland
70
placenta
70
prostate gland
69
artery
64
ureter
57
penis
50
lymph node
48
thymus
47
gonad
45
esophagus
41
spinal cord
33
spleen
25
nerve
24
lymphoid tissue
23
ovary
23
testis
23
thyroid gland
22
lymphatic vessel
20
vein
19
mouth
18
skeleton
14
bronchus
13
breast
13
pituitary gland
11
bone marrow
10
tongue
10
urinary bladder
10
vagina
4
nose
3
trachea
1
pericardium
Project
734
AMP
140
KPMP
21
ENCODE
20
T1D
2
community
Genome assembly (visualization)
561
hg19
166
GRCh38
annotation_type!
binding sites
BIOSAMPLE
TYPE
917 results
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Clear Filters
gene expression
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
differential activity
variant allelic effects
eQTL
histone modifications
Fine-mapped variants
sQTL
variant to gene
primary cell
epithelial cell of proximal tubule
16
2
1
1
1
1
glomerular endothelial cell
14
2
1
2
1
1
pancreatic beta cell
3
3
8
3
1
pancreatic ductal cell
3
3
6
3
1
2
pancreatic alpha cell
3
3
7
3
1
+ See 80 more…
tissue
kidney
7
29
14
10
16
1
1
2
islet of Langerhans
11
1
6
3
1
13
1
2
2
2
right kidney
20
10
1
10
1
renal cortex interstitium
20
9
1
9
1
renal pelvis
19
9
2
9
1
+ See 25 more…
cell line
EndoC_BH1
8
1
8
3
1
HEK293
3
1
1
1
1
ACHN
2
1
1
1
Caki2
2
1
1
1
Panc1
2
2
1
+ See 12 more…
in vitro differentiated cells
pancreatic ductal cell
3
renal cell carcinoma
1
See all biosamples
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